BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21309 (UTR included)
(1142 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_736_C1 121 3e-27
BF01031B1D09 94 6e-19
BF01059A2H01 90 9e-18
BF01054B2B08 88 4e-17
BF01052B2H04 86 1e-16
BF01057B1C11 78 3e-14
BF01059B2F03 70 8e-12
>BF14_736_C1
Length = 796
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 415 gtggtagagcctagttgtggtcaagttactgcagctcgaacatgggctagctcgaccggg 474
|||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 584 gtggtagagcctagctgtggtcaagttactacagctcgaacatgggctggctcgaccggg 643
Query: 475 gaagtaccaccct 487
|||||||||||||
Sbjct: 644 gaagtaccaccct 656
>BF01031B1D09
Length = 754
Score = 93.7 bits (47), Expect = 6e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 421 gagcctagttgtggtcaagttactgcagctcgaacatgggctagctcgaccggggaagta 480
|||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||| |||||
Sbjct: 476 gagcctagttgtggtcaagttactgcagctcgaacaagggctggcttgacggggcaagta 535
Query: 481 ccaccct 487
|||||||
Sbjct: 536 ccaccct 542
>BF01059A2H01
Length = 865
Score = 89.7 bits (45), Expect = 9e-18
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 490 agtagtctttaatggctgcgattcgtccgatgagcgagagagccggttgcccattctctt 549
|||||||||||||||||||||||| ||||||||| ||||||||| ||||||| ||| |||
Sbjct: 257 agtagtctttaatggctgcgattcttccgatgagtgagagagccagttgccctttccctt 198
Query: 550 ttcccatcc 558
||| |||||
Sbjct: 197 ttctcatcc 189
>BF01054B2B08
Length = 807
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 493 agtctttaatggctgcgattcgtccgatgagcgagagagccggttgcccattctcttttc 552
||||||||||||||||| ||||| ||||||| ||||||||||||||||| ||| || |||
Sbjct: 674 agtctttaatggctgcgtttcgttcgatgagtgagagagccggttgccctttccctgttc 733
Query: 553 ccatcctttcct 564
||| ||||||||
Sbjct: 734 ccaccctttcct 745
>BF01052B2H04
Length = 668
Score = 85.7 bits (43), Expect = 1e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 413 aggtggtagagcctagttgtggtcaagttactgcagctcgaacatgggctagctcgaccg 472
|||| ||||||||| | |||||||| || ||| ||||||||||||||||| ||||| |||
Sbjct: 475 aggttgtagagcctggctgtggtcatgtaactacagctcgaacatgggctggctcgtccg 416
Query: 473 gggaagtaccaccct 487
|||||||||||||||
Sbjct: 415 gggaagtaccaccct 401
>BF01057B1C11
Length = 848
Score = 77.8 bits (39), Expect = 3e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 413 aggtggtagagcctagttgtggtcaagttactgcagctcgaacatgggctagctcgaccg 472
|||||||||||||||| |||||||| || ||| ||| ||||||||||||| ||||| |||
Sbjct: 47 aggtggtagagcctagctgtggtcatgtaactacagatcgaacatgggctggctcgtccg 106
Query: 473 gggaagt 479
|||||||
Sbjct: 107 gggaagt 113
>BF01059B2F03
Length = 703
Score = 69.9 bits (35), Expect = 8e-12
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 412 taggtggtagagcctagttgtggtcaagttactgcagctcgaacatgggctagctcgacc 471
||||||||||||||||| ||| |||| || ||| ||| ||||||||||||| |||||| |
Sbjct: 132 taggtggtagagcctagctgtagtcatgtaactacagatcgaacatgggctggctcgagc 73
Query: 472 ggggaagtaccaccc 486
|||||| |||||||
Sbjct: 72 ggggaatgaccaccc 58
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 134,981
Number of extensions: 2256
Number of successful extensions: 2256
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 2256
Number of HSP's successfully gapped: 9
Length of query: 1142
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1125
Effective length of database: 8,119,229
Effective search space: 9134132625
Effective search space used: 9134132625
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)