BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21312 (UTR included)
(4561 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A2B10 910 0.0
BF01043B2B07 769 0.0
>BF01052A2B10
Length = 459
Score = 910 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Plus
Query: 1039 aaagtttaaaaaatgcaatgactcaagaacgcaggcgatacgggtttgtattagagcgcc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagtttaaaaaatgcaatgactcaagaacgcaggcgatacgggtttgtattagagcgcc 60
Query: 1099 agtgttctctcgctaaacattggcttgcataccatacagccggtgcaacagcttataaca 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtgttctctcgctaaacattggcttgcataccatacagccggtgcaacagcttataaca 120
Query: 1159 ctggcctagatgaatggctagaagtatcgaggactagagaattcctgccgtccaatgttg 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggcctagatgaatggctagaagtatcgaggactagagaattcctgccgtccaatgttg 180
Query: 1219 aagccatgtttgtgagcagaatgaggcaagtatctttctgggctgatgaagatgtatacg 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagccatgtttgtgagcagaatgaggcaagtatctttctgggctgatgaagatgtatacg 240
Query: 1279 caagtccacgtaatggcgatgacgatgatggtgcttccgttggttccgccttacgcaaaa 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caagtccacgtaatggcgatgacgatgatggtgcttccgttggttccgccttacgcaaaa 300
Query: 1339 caagatctgtagatgcttcttgtctagacgttagatctattgcagatctgggatcaccca 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caagatctgtagatgcttcttgtctagacgttagatctattgcagatctgggatcaccca 360
Query: 1399 cccatggaatatctagagccaaatctgatttaaatctacaagcaagtctgcatactatgg 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccatggaatatctagagccaaatctgatttaaatctacaagcaagtctgcatactatgg 420
Query: 1459 aacaagatatagaaacacgaaataaaacacgtccctctt 1497
|||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacaagatatagaaacacgaaataaaacacgtccctctt 459
>BF01043B2B07
Length = 796
Score = 769 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Plus
Query: 1888 agggtcgactggcaaacagctctcctggtttaccaccgacgctgccggcaccttcaccaa 1947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 agggtcgactggcaaacagctctcctggtttaccaccgacgctgccggcaccttcaccaa 183
Query: 1948 gtgctctaagcacttcagcaagtgctacattccatccaaccccgctagcagcagtagcat 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gtgctctaagcacttcagcaagtgctacattccatccaaccccgctagcagcagtagcat 243
Query: 2008 caagcgctataaaaaactctacttcggcggctagttttactactcatgcggttatagaaa 2067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 caagcgctataaaaaactctacttcggcggctagttttactactcatgcggttatagaaa 303
Query: 2068 ctagaagttttgggccacaaacgttaccaatgcgttctcagattgcccaaaaagtagctc 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctagaagttttgggccacaaacgttaccaatgcgttctcagattgcccaaaaagtagctc 363
Query: 2128 cggctaaaactgttgtgtcggcagtaggtgcagtgggtaatgtatccctgcatagttcca 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cggctaaaactgttgtgtcggcagtaggtgcagtgggtaatgtatccctgcatagttcca 423
Query: 2188 acgattccgggttttccaatgaaccacccccacaacctgatgttgactacagcgacgaag 2247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 acgattccgggttttccaatgaaccacccccacaacctgatgttgactacagcgacgaag 483
Query: 2248 aggcacaacgacttcgcgttcctatcag 2275
||||||||||||||||||||||||||||
Sbjct: 484 aggcacaacgacttcgcgttcctatcag 511
Score = 365 bits (184), Expect = e-100
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 2274 agtaaatccgcacagcttaacaatgaacataaagcttatctgttaaaaacacaaagttta 2333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agtaaatccgcacagcttaacaatgaacataaagcttatctgttaaaaacacaaagttta 672
Query: 2334 aagagaggtccaggtcctaagaccacaaataatggatatttgactgacgatcaacaatta 2393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aagagaggtccaggtcctaagaccacaaataatggatatttgactgacgatcaacaatta 732
Query: 2394 ctactgcgtaatatgttggatatggataaagattctcaaaaaattaaaagaacaaaatcc 2453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ctactgcgtaatatgttggatatggataaagattctcaaaaaattaaaagaacaaaatcc 792
Query: 2454 tttt 2457
||||
Sbjct: 793 tttt 796
Score = 81.8 bits (41), Expect = 9e-15
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1841 accagcacgcatgtttggagacactgttacggctcatcatgtagcaaagg 1890
|||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 accagcacgcatgtttggagacactgttacggctnnncatgtagcaaagg 50
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 620,388
Number of extensions: 14066
Number of successful extensions: 14066
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 14066
Number of HSP's successfully gapped: 4
Length of query: 4561
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4543
Effective length of database: 8,109,745
Effective search space: 36842571535
Effective search space used: 36842571535
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)