BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21329 (UTR included)
(1984 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B2A08 1453 0.0
>BF01014B2A08
Length = 782
Score = 1453 bits (733), Expect = 0.0
Identities = 765/775 (98%), Gaps = 3/775 (0%)
Strand = Plus / Plus
Query: 384 ttcttgagagcggctagataaataaatcataatgtttctatgaatctttatata---tca 440
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 8 ttcttgagagcggctagataaataaatcaaaatgtttctatgaatctttatatactatca 67
Query: 441 tctgagccagctgcgatagattcatgaaattatattggacattgtgtaagcggctttaca 500
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tctgagctagctgcgatagattcatgaaattatattggacattgtgtaagcggctttaca 127
Query: 501 atgtatgtaaacccagcgttatgtcatttgatgtccttctttattggcatcactcaagta 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atgtatgtaaacccagcgttatgtcatttgatgtccttctttattggcatcactcaagta 187
Query: 561 tgcttcatgccagcacccgtcggtgactgcagcgcgtgttgtcctcacgacgacgatata 620
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 188 tgcttcatgccagcacccgtcggtgactgtagcgcgtgttgtcctcacgacgacgatata 247
Query: 621 gatatacaatataaactatatacgaggtctaatccgatcaaatacaacatcatttaccca 680
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 248 gatatacaatataaactatatacgaggtctaatccgatcaaatacagcatcatttaccca 307
Query: 681 aggaatgccaccgctctcgccgacactccatttaacccaactaagccgactgtcatttat 740
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 308 aggaatgccaccgctctcgccgacactccatttaacccagctaagccgactgtcatttat 367
Query: 741 ttattcggtttctccgaggctgtgaccgggcccagttcgacgactatgagacgagctttt 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttattcggtttctccgaggctgtgaccgggcccagttcgacgactatgagacgagctttt 427
Query: 801 ctgagacgagattacaactttatcagcgttgattggtccagactcattgtattcccgtgg 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctgagacgagattacaactttatcagcgttgattggtccagactcattgtattcccgtgg 487
Query: 861 tatttgacggcggttaaaaacacacggtatatgggccagagattggcggagtttataagt 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tatttgacggcggttaaaaacacacggtatatgggccagagattggcggagtttataagt 547
Query: 921 ttcctgaattctaacggcattccggccgagtctctctacgtaataggcttttcgttaggt 980
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttcctgaattctaacggtattccggccgagtctctctacgtaataggcttttcgttaggt 607
Query: 981 gcagaggctgcaggcttcgctgggaaatatctcaaatccagcggtttaaggattggaaga 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gcagaggctgcaggcttcgctgggaaatatctcaaatccagcggtttaaggattggaaga 667
Query: 1041 ataacaggtttggacccagcgtatcctgggtatagttttggtggcaagaatgctcacctt 1100
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ataacaggtttggatccagcgtatcctgggtatagttttggtggcaagaatgctcacctt 727
Query: 1101 gctaaaggggacgccctgtttgttgacataatacacacaaaccctggtgtatttg 1155
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gctaaaggggacgccctgtttgttgacataatacacacaaaccctggtgtatttg 782
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 278,889
Number of extensions: 19142
Number of successful extensions: 19142
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19141
Number of HSP's successfully gapped: 1
Length of query: 1984
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1967
Effective length of database: 8,119,229
Effective search space: 15970523443
Effective search space used: 15970523443
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)