BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21339 (UTR included)
(1337 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1567_C1 868 0.0
>BF14_1567_C1
Length = 1193
Score = 868 bits (438), Expect = 0.0
Identities = 444/446 (99%)
Strand = Plus / Plus
Query: 428 ggcttgtgcaacaaaggaaggatataccaaaagattgcctattttttgcaaattttaaca 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ggcttgtgcaacaaaggaaggatataccaaaagattgcctattttttgcaaattttaaca 135
Query: 488 attttcgactaaaatggattgcgttaccacattaaaaatccttgtcattggagagagtgg 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 attttcgactaaaatggattgcgttaccacattaaaaatccttgtcattggagagagtgg 195
Query: 548 agttggaaagtcaagcatcatcctagcgttcactacaggggactataattcttcgtttcc 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 agttggaaagtcaagcatcatcctagcgttcactacaggggactataattcttcgtttcc 255
Query: 608 ggccacaataggagtcgactacaaatgcaaggttatggaagtgaacggtttaaaagtgaa 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggccacaataggagtcgactacaaatgcaaggttatggaagtgaacggtttaaaagtgaa 315
Query: 668 actgggtatttgggatacggccggccaggagagatatagaactttaaccaacagttttta 727
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 316 actgggtatttgggatacggcgggccaggagagatatagaactttaaccaacagttttta 375
Query: 728 cagggacgcccacggggcaatactagtctatgatgtttcagaaccaaagaccttacagaa 787
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cagggacgcccacggggcgatactagtctatgatgtttcagaaccaaagaccttacagaa 435
Query: 788 actgagtgaatgggtcgatgaactgcaggtgtactccacaaagaagaacatcgtgtgttt 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 actgagtgaatgggtcgatgaactgcaggtgtactccacaaagaagaacatcgtgtgttt 495
Query: 848 ggttgtgggaaataaaattgataagg 873
||||||||||||||||||||||||||
Sbjct: 496 ggttgtgggaaataaaattgataagg 521
Score = 151 bits (76), Expect = 3e-36
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 275 gggtattgtttctaaataaagttatttatttgtaatttctatcaactataagttttgttg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtattgtttctaaataaagttatttatttgtaatttctatcaactataagttttgttg 60
Query: 335 attatattaaaaactg 350
||||||||||||||||
Sbjct: 61 attatattaaaaactg 76
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 335,693
Number of extensions: 36235
Number of successful extensions: 36235
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 36235
Number of HSP's successfully gapped: 2
Length of query: 1337
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1320
Effective length of database: 8,119,229
Effective search space: 10717382280
Effective search space used: 10717382280
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)