BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21348 (UTR included)
(2035 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B1F05 1013 0.0
>BF01043B1F05
Length = 779
Score = 1013 bits (511), Expect = 0.0
Identities = 529/536 (98%)
Strand = Plus / Plus
Query: 534 atgaatcagcagtgcaaggtgtgcggggaaccggcggctggttttcacttcggtgctttc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atgaatcagcagtgcaaggtgtgcggggaaccggcggctggttttcacttcggtgctttc 303
Query: 594 acgtgtgaaggatgtaagtctttcttcgggcgaacgtacaacaacctctcctcgatttct 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 acgtgtgaaggatgtaagtctttcttcgggcgaacgtacaacaacctctcctcgatttct 363
Query: 654 gaatgcaagaacaatggtgaatgtgtcatcaataagaaaaacaggacggcttgcaaggca 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaatgcaagaacaatggtgaatgtgtcatcaataagaaaaacaggacggcttgcaaggca 423
Query: 714 tgcaggttgcggaaatgtttgctagtcggcatgtccaaatcaggatcacgttacgggcga 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgcaggttgcggaaatgtttgctagtcggcatgtccaaatcaggatcacgttacgggcga 483
Query: 774 agatcgaactggtttaagatccactgccttttacaagagcagcagcaacaacacatgcaa 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agatcgaactggtttaagatccactgccttttacaagagcagcagcaacaacacatgcaa 543
Query: 834 caattacagacaagtaaatcacaaaccacattaaatacttccatcagcccatcttttttg 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 caattacagacaagtaaatcacaaaccacattaaatacttccatcagcccatcttttttg 603
Query: 894 ccaacaaatcttttgccggcagccgctcttgcggaatattataagagtacagaaaagaat 953
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 604 ccaacaaatcttttgccggcagccgctcttgcggagtattataagagtacagaaaagaat 663
Query: 954 attttcaccgacgaagtgacgcgacagagcgtttcgccttccgattctggtgcttcttcg 1013
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 attttcaccgacgaagttacgcgacagagcgtttcgccttccgattctggtgcttcttcg 723
Query: 1014 gctgacccagaggatgacaatagttccaggagtaccagcggcttgagtattttcag 1069
|||||||||| ||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 724 gctgacccagnnnatgacaacagttctaggagtaccagcggcttgagtattttcag 779
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,902
Number of extensions: 5367
Number of successful extensions: 5367
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5367
Number of HSP's successfully gapped: 1
Length of query: 2035
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2018
Effective length of database: 8,119,229
Effective search space: 16384604122
Effective search space used: 16384604122
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)