BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21360 (UTR included)
(1873 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B2E02 1501 0.0
BF14_94_C1 129 2e-29
>BF01053B2E02
Length = 786
Score = 1501 bits (757), Expect = 0.0
Identities = 775/781 (99%)
Strand = Plus / Plus
Query: 627 gcgatgagacactgcgatcagcctgtcgccgccatatcctcaggatgtgaactctttatg 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgatgagacactgcgatcagcctgtcgccgccatatcctcaggatgtgaactctttatg 60
Query: 687 aggtttataacattagccaaacttgatgttaagtcatttgaagaatgcgaacaaataatg 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggtttataacattagccaaacttgatgttaagtcatttgaagaatgcgaacaaataatg 120
Query: 747 ctacaaagaggacggatattcttagaaactttattagaagctagaggaaaagttgccaaa 806
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 ctacaaagaggacggatattcttagagactttattagaagctagaggaaaagttgccaaa 180
Query: 807 caagcactcccattcatagtcgatggttgtaaaatagtaacccattcaagatcgagggtg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caagcactcccattcatagtcgatggttgtaaaatagtaacccattcaagatcgagggtg 240
Query: 867 gtgcttcaagctatgatagaagctgctaaagccaataaaaggttccaagtttatgtcacc 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgcttcaagctatgatagaagctgctaaagccaataaaaggttccaagtttatgtcacc 300
Query: 927 atatcaagtccggataatagcggtattcgtatgcacaaagaattggaagctgccgggata 986
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 atatcaagtccggataatagcggtattcgtatgcacaaggaattggaagctgccgggata 360
Query: 987 gatgctacattaatcctggacgcgtccttgggatatatcctggaacacgcggaccttgtg 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatgctacattaatcctggacgcgtccttgggatatatcctggaacacgcggaccttgtg 420
Query: 1047 atgctgggcgctgagggcgttactgagagtggaggcattattaataagatcggtacatac 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgctgggcgctgagggcgttactgagagtggaggcattattaataagatcggtacatac 480
Query: 1107 ggtctagcaatggctgcgatggaactcaaaaaaccggtttacgttctgacggaaagtttc 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtctagcaatggctgcgatggaactcaaaaaaccggtttacgttctgacggaaagtttc 540
Query: 1167 aaattctctagaatatatcctttgaatcagcgagacctgccgaatgagttcaaatattta 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaattctctagaatatatcctttgaatcagcgagacctgccgaatgagttcaaatattta 600
Query: 1227 tctagcgttttaaaatctggtgatttatcgaaacagcaccctttagtcgactacacgccc 1286
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 601 tctagcgttttaaaatctggcgatttatcaaaacagcaccctttagtcgactacacgccc 660
Query: 1287 ccggcttacataactttacttttcactgacctgggactactgactccgtcagccgtcagc 1346
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 661 ccagcttacataactttacttttcactgacctgggactactgactccgtcggccgtcagc 720
Query: 1347 gacgagctcatcaaattatacttgtaaattatgaaatataataaaaaaatatttaaattt 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gacgagctcatcaaattatacttgtaaattatgaaatataataaaaaaatatttaaattt 780
Query: 1407 t 1407
|
Sbjct: 781 t 781
>BF14_94_C1
Length = 2148
Score = 129 bits (65), Expect = 2e-29
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1801 aaaagtaatttttatgtggcacttttaatgatataacatgtgagtaatatttacaataat 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2024 aaaagtaatttttatgtggcacttttaatgatataacatgtgagtaatatttacaataat 2083
Query: 1861 gtaaa 1865
|||||
Sbjct: 2084 gtaaa 2088
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,096
Number of extensions: 7025
Number of successful extensions: 7025
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7025
Number of HSP's successfully gapped: 2
Length of query: 1873
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1856
Effective length of database: 8,119,229
Effective search space: 15069289024
Effective search space used: 15069289024
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)