BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21367 (UTR included)
(3577 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B2C02 1376 0.0
BF01034B1B09 1158 0.0
>BF01025B2C02
Length = 710
Score = 1376 bits (694), Expect = 0.0
Identities = 706/710 (99%)
Strand = Plus / Plus
Query: 244 gacgtctcgctcgccccgtcattctcatttcatcggccgcttttttttttagttcgactt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacgtctcgctcgccccgtcattctcatttcatcggccgcttttttttttagttcgactt 60
Query: 304 ttattattacggcggcacggtgctaacaataaaattcgtttaattttaaaaaattacatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttattattacggcggcacggtgctaacaataaaattcgtttaattttaaaaaattacatt 120
Query: 364 cgaaaattttaatttttcgatcattgaatgacgtagaaggtgcagtgataacggggaaat 423
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaaaatttttatatttcgatcattgaatgacgtagaaggtgcagtgataacggggaaat 180
Query: 424 gtgaatagtgtttgtgtttacgttgtgatgtgcgtgctagactgtcgtgttgtgtagtgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgaatagtgtttgtgtttacgttgtgatgtgcgtgctagactgtcgtgttgtgtagtgt 240
Query: 484 taagtgtaggctttgtaatggggtacgcgtcgaacggtgcggggcgggcggcgcacgagg 543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taagtgtaggctttataatggggtacgcgtcgaacggtgcggggcgggcggcgcacgagg 300
Query: 544 ccctgctggcgcgccaggacgctgagctgaggctcatggagaccatgaagagaagcctcc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccctgctggcgcgccaggacgctgagctgaggctcatggagaccatgaagagaagcctcc 360
Query: 604 aggctaagatgaaaagcgacagagaatatgctctggcgctatccgctgcggctgcgcaag 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggctaagatgaaaagcgacagagaatatgctctggcgctatccgctgcggctgcgcaag 420
Query: 664 gacaaaagatggacaaatgcgaagaactgaacggttcagtgattgcttctgcctggcgca 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacaaaagatggacaaatgcgaagaactgaacggttcagtgattgcttctgcctggcgca 480
Query: 724 ccatgaccgaggaatgggagaacactagccgtctgatcaaggccaatgctgaagctctcg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccatgaccgaggaatgggagaacactagccgtctgatcaaggccaatgctgaagctctcg 540
Query: 784 attccagggcgttggaccgtctcaattcattgatgacggagagacggaaggcccgcaagg 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attccagggcgttggaccgtctcaattcattgatgacggagagacggaaggcccgcaagg 600
Query: 844 tctatcatgaggatcattcaaaaatatcatctcagtttacacaactctcagaggaagtac 903
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tctatcatgaagatcattcaaaaatatcatctcagtttacacaactctcagaggaagtac 660
Query: 904 aaagaaaacaaagtgaatatcaaaaatgtttagagtcatacaaacaaatg 953
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaagaaaacaaagtgaatatcaaaaatgtttagagtcatacaaacaaatg 710
>BF01034B1B09
Length = 807
Score = 1158 bits (584), Expect = 0.0
Identities = 628/641 (97%), Gaps = 5/641 (0%)
Strand = Plus / Plus
Query: 2937 aatggttaccgcatgccggcaccagagggttgttccgaggatgtctacgcactgatgctg 2996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aatggttaccgcatgccggcaccagagggttgttccgaggatgtctacgcactgatgctg 71
Query: 2997 cgctgttgggaatacgaaccggagaaaagaccacatttccatcagatatacacgctcata 3056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cgctgttgggaatacgaaccggagaaaagaccacatttccatcagatatacacgctcata 131
Query: 3057 gacaacatttacaacagatgaggggaacaaaaacgattcacaccatttgttcaaatataa 3116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gacaacatttacaacagatgaggggaacaaaaacgattcacaccatttgttcaaatataa 191
Query: 3117 tgaagcggacggctctcattggtcgatatttttttcaataatcttcttattggtcgaaaa 3176
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 192 ----gcggacggctctcattggtcgatatttt-ttcaataatcttcttattggtcgaaaa 246
Query: 3177 tactttgcaaatatttcatttgaatgcaataaaatctttaatcaaatatatacaacgtct 3236
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 247 tactttgcaaatatttcatttgaatgcaataaaatcttcaatcaaatatatacaacgtct 306
Query: 3237 atggtatgttttgtttttgaataatttacgaatagaaagatctatgctattcaaatattt 3296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atggtatgttttgtttttgaataatttacgaatagaaagatctatgctattcaaatattt 366
Query: 3297 taattcaaccttatcttgatagcagtaataaataatcgatttttagtttgaatagaacta 3356
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 taattcaaccttatcttgatagcagtactaaataatcgatttttagtttgaatagaacta 426
Query: 3357 aaaatattgatgttctttaagagaatatattatataaatagagtttaagtttataggcta 3416
|||||||| || |||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 427 aaaatattcattttctttaagagaatatattatataaataaagtttaagcttataggcta 486
Query: 3417 tttgtcacttaatgatcgactgtgtatattgtgtatgtatggtttgtcttccatttaatg 3476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttgtcacttaatgatcgactgtgtatattgtgtatgtatggtttgtcttccatttaatg 546
Query: 3477 ttgcatgttgttaagctatgatttataataattttaatcgattctctttaattttttttt 3536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttgcatgttgttaagctatgatttataataattttaatcgattctctttaattttttttt 606
Query: 3537 cttgtatattatctttaaattaaaattattgtatcgataga 3577
||||||||||||||||||||||||||| | |||||||||||
Sbjct: 607 cttgtatattatctttaaattaaaattctagtatcgataga 647
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 368,480
Number of extensions: 7049
Number of successful extensions: 7049
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7047
Number of HSP's successfully gapped: 2
Length of query: 3577
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3559
Effective length of database: 8,109,745
Effective search space: 28862582455
Effective search space used: 28862582455
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)