BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21405 (UTR included)
(3058 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B1B09 1179 0.0
>BF01014B1B09
Length = 788
Score = 1179 bits (595), Expect = 0.0
Identities = 734/780 (94%), Gaps = 24/780 (3%)
Strand = Plus / Plus
Query: 2179 atttaccgaaacacgtgcatttttatttcaaacgatatgcaattgaagatttgcccctgc 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 atttaccgaaacacgtgcatttttatttcaaacgatatgcaattgaagatttgcccctgc 71
Query: 2239 aagaggatgatttaagacattggcttcaagatcgatggaaagaaaaaaacagctgcttgg 2298
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 72 aagaggatgatttaagacattggcttcaagatcgttggaaagaaaaaaacagctgcttgg 131
Query: 2299 aaaaatttcatgttgatggatcttatatcgacttcaaagccaaagccacaccaaaaaaac 2358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aaaaatttcatgttgatggatcttatatcgacttcaaagccaaagccacaccaaaaaaac 191
Query: 2359 acgagccaagatcattatttgtcgcgaagctagcctttattatatggacttttttcgatg 2418
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 192 atgagccaagatcattatttgtcgcgaagctagcatttattatatggacttttttcgaca 251
Query: 2419 ttttgtttatatattctttatattatagcatcttattcagattttgggttatctatcata 2478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttttgtttatatattctttatattatagcatcttattcagattttgggttatctatcata 311
Query: 2479 ctttattattcatcttggtaactaaatactttgaaggttttcataatattcagtacaaaa 2538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctttattattcatcttggtaactaaatactttgaaggttttcataatattcagtacaaaa 371
Query: 2539 tttttaataaagtgccctaaaatttgatgatattaatatgtatgtacttattattataat 2598
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 372 tttttaataaagtgccctaaaatttgatgatattaatatgtacgtacttatgattataat 431
Query: 2599 aataaaagtgtgttgaacccttctgagttcgttaaatgtaccaagtgtagtgttatttta 2658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aataaaagtgtgttgaacccttctgagttcgttaaatgtaccaagtgtagtgttatttta 491
Query: 2659 agattaagggatcgtttttttttcaattgattccccaaactactttcaattgaaattgct 2718
| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaattaaaagatcg--tttttttcaattgattccccaaactactttcaattgaaattgct 549
Query: 2719 aaaatatata----tatttgtattttagtgcctcaaaac----aaatgacaaattttgtg 2770
|||||||||| ||| ||||||| ||||||||||||| ||||||||||||||| |
Sbjct: 550 aaaatatatatatgtatatgtatttaagtgcctcaaaacaaaaaaatgacaaattttgcg 609
Query: 2771 acattatgtttaaagt-------------attccttaatatatgcctaaagctggaaagt 2817
||||||||| |||||| ||||||||||||||||||||||||||||| |
Sbjct: 610 acattatgtataaagtatttcttaaaaacattccttaatatatgcctaaagctggaaa-t 668
Query: 2818 ttatcattagctttaaatatgattttggtctcgtactgcaactcaatctctgtgacgttt 2877
|||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 669 ttatcattagttttaaatatgattttggtctcgcactgcaacttaatctctgtgaagttt 728
Query: 2878 ttacctttagtcaaatcattcatttttatgactatcatttacgcgagccaccaacatcag 2937
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 729 aaacctttagtcaaatcagtcatttttatgactatcacttacgcgagccaccaacatcag 788
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 421,699
Number of extensions: 8662
Number of successful extensions: 8662
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8658
Number of HSP's successfully gapped: 2
Length of query: 3058
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3040
Effective length of database: 8,109,745
Effective search space: 24653624800
Effective search space used: 24653624800
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)