BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21421 (UTR included)
(1273 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2865_C1 767 0.0
>BF14_2865_C1
Length = 771
Score = 767 bits (387), Expect = 0.0
Identities = 396/399 (99%)
Strand = Plus / Plus
Query: 30 gccgctagttccggtaccgcggaggctgacttcgaccgtctatcagagatcttgaacagc 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gccgctagttccggtaccgcggaggctgacttcgaccgtctatcagagatcttgaacagc 432
Query: 90 gtcagtagtttgaaattcatttgtctcgacgtcgccaacggatactcgcagcacttcgtg 149
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 433 gtcagtagtttgaaattcatttgtctggacgtcgccaacggatactcacagcacttcgtg 492
Query: 150 gagtacgtgaggcgagtgagggcggcattcccatcacacaccatcattgctggtaacgtg 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gagtacgtgaggcgagtgagggcggcattcccatcacacaccatcattgctggtaacgtg 552
Query: 210 gtgactggggagatggtggaggagctcatcctgtcaggagctgatatcataaaggtcggt 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtgactggggagatggtggaggagctcatcctgtcaggagctgatatcataaaggtcggt 612
Query: 270 atcggtccggggtcggtgtgcacgacccgcatgaagacgggcgtgggataccctcagctg 329
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atcgggccggggtcggtgtgcacgacccgcatgaagacgggcgtgggataccctcagctg 672
Query: 330 tccgccgtcatagagtgcgcggacgccgcccatgggctcaagggacacattatatctgac 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tccgccgtcatagagtgcgcggacgccgcccatgggctcaagggacacattatatctgac 732
Query: 390 ggcggttgtacttgtcctggcgacgtggcgaaagccttc 428
|||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ggcggttgtacttgtcctggcgacgtggcgaaagccttc 771
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 183,830
Number of extensions: 5295
Number of successful extensions: 5295
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5295
Number of HSP's successfully gapped: 1
Length of query: 1273
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1256
Effective length of database: 8,119,229
Effective search space: 10197751624
Effective search space used: 10197751624
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)