BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21429 (UTR included)
(2521 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A1D04 579 e-165
>BF01017A1D04
Length = 752
Score = 579 bits (292), Expect = e-165
Identities = 304/308 (98%)
Strand = Plus / Plus
Query: 2214 ttagttgatgtgaaaaatctttgttttatattaaaagcattatttagtgttaatgtaaaa 2273
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ttagttgatgtgtaaaatctttgttttatattaaaagcattatttagtgttaatgtaaaa 70
Query: 2274 atattggtaagattttctgctgaagacttatttgatttgtttataaaacatgtaatttct 2333
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 71 atattggtaagattttctgctgaagacttatttgatttgtttatataacatgtaatttct 130
Query: 2334 gataaaaaaatattttttcatgaataaaatttatagcggtgacgaaatagaagaataata 2393
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 131 gataaaaaaatattttttcatgagtaaaatttatagcggtgacgaaatagaagaataata 190
Query: 2394 agagttttttaattgaaatgattattaatataagattatgttgaaaatttgtgtgtatga 2453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 agagttttttaattgaaatgattattaatataagattatgttgaaaatttgtgtgtatga 250
Query: 2454 agatcacttttagccaggtctagtcaatgcattaaaaacctaataataccttcatatcct 2513
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 251 agatcacttttagccaggtctagtcaatgcattaaaaacctaaaaataccttcatatcct 310
Query: 2514 taaagata 2521
||||||||
Sbjct: 311 taaagata 318
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 361,230
Number of extensions: 7646
Number of successful extensions: 7646
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7646
Number of HSP's successfully gapped: 1
Length of query: 2521
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2504
Effective length of database: 8,119,229
Effective search space: 20330549416
Effective search space used: 20330549416
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)