BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21430 (UTR included)
(735 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 268 1e-71
BF01049A2D11 109 6e-24
>BF14_729_C3
Length = 2041
Score = 268 bits (135), Expect = 1e-71
Identities = 228/259 (88%)
Strand = Plus / Plus
Query: 466 gaacacatctcagacatcaaaaataggcgcgcgtcgaagtaagcaatatgtaaacacaca 525
||||||||||||||||||||||| |||||||||||||||| |||| | ||| ||||||||
Sbjct: 1212 gaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaacacaca 1271
Query: 526 atggccaaagcaggccactacattcagtttgataaaccaaaaatattcgcttgtgaagac 585
|||| |||| ||||||||||||||| ||||||||||| |||| ||||| | ||||||
Sbjct: 1272 atggacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcgggaagac 1331
Query: 586 aagtatatatcaaggttaatccgcgaatgtattgaaattagaaaatatcccaatttcaat 645
||||||||| | || ||||| ||||| ||||||||||| |||| ||||||||||||||
Sbjct: 1332 aagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaatttcaat 1391
Query: 646 agagaagatagctggaatctatcaaagacctggaacccccttcttaaaaatataaaatcc 705
||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 1392 agagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatcc 1451
Query: 706 tatgtccgagaccccaccg 724
|||||||| ||| |||||
Sbjct: 1452 catgtccgaaaccacaccg 1470
Score = 79.8 bits (40), Expect = 6e-15
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 116 tacattggacaggcaaagaagagcatccgtataagggtgcaagaacacatctcagacatc 175
|||||||||||| | |||| ||||||| ||| ||| || | ||||||||||||||||||
Sbjct: 1170 tacattggacagacgaagaggagcatcggtacaagagttaaggaacacatctcagacatc 1229
Query: 176 aaaaataggcgcgcgtcgaa 195
||||| ||||||||||||||
Sbjct: 1230 aaaaacaggcgcgcgtcgaa 1249
>BF01049A2D11
Length = 776
Score = 109 bits (55), Expect = 6e-24
Identities = 125/147 (85%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 424 tacattggccaggcaaagaggagcattaatataagggtgctagaacacatctcagacatc 483
|||||||| ||| ||||||||||||| ||| |||||| ||||||||||||||| |||
Sbjct: 620 tacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctcagaaatc 679
Query: 484 aa-aaataggcgcgcgtcgaagtaagcaatatgtaaacacacaatggccaaagcaggcca 542
| ||||||| | | ||||||| |||| ||||| |||||||||||| |||| |||||||
Sbjct: 680 atgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaaccaggcca 739
Query: 543 ctacattcagtttgataaaccaaaaat 569
|||||||| ||||||||||||| ||||
Sbjct: 740 ctacattcggtttgataaaccacaaat 766
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 109,597
Number of extensions: 2833
Number of successful extensions: 2833
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2832
Number of HSP's successfully gapped: 3
Length of query: 735
Length of database: 8,280,457
Length adjustment: 16
Effective length of query: 719
Effective length of database: 8,128,713
Effective search space: 5844544647
Effective search space used: 5844544647
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)