BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21448 (UTR included)
(1420 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_317_C2 870 0.0
>BF14_317_C2
Length = 743
Score = 870 bits (439), Expect = 0.0
Identities = 460/467 (98%)
Strand = Plus / Plus
Query: 486 gaaacgacagaaaccatggccgatgttgatgttgaggttccgaacaaccccgtcctgagc 545
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12 gaaacgacagaaaccatggccgatgttgatgttgaggttccaaacaaccccgtcctgagc 71
Query: 546 ggaggtgctatggatgtaaacacagccctacaggaagtgctcaagacagctctcatccac 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ggaggtgctatggatgtaaacacagccctacaggaagtgctcaagacagctctcatccac 131
Query: 606 gggggtctggttcatggtctacacgaggccgctaaggctttagacaagagacaagctgtt 665
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 132 gggggtctggtccatggtctacacgaggccgcaaaggctttagacaagagacaagctgtt 191
Query: 666 ctctgtgtcctagctgagaattgtgatgaggctgcttacaagaaattggtacaagccctc 725
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 192 ctctgtgtcctggctgagaattgtgatgaggctgcttacaagaaattggtacaggccctc 251
Query: 726 tgtaatgaacatcagataccccttgttaaggtcgacaacaacaagaaactcggtgagtgg 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgtaatgaacatcagataccccttgttaaggtcgacaacaacaagaaactcggtgagtgg 311
Query: 786 gccggtttatgcaaaattgacaaggacggcaaagcaaggaaaatcgtcggttgctcttgc 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gccggtttatgcaaaattgacaaggacggcaaagcaaggaaaatcgtcggttgctcttgc 371
Query: 846 gttgttataacagactttggtgaagagacgccagcgttggatgttctcaaggactacctg 905
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 372 gttgttataacagactttggcgaggagacgccagcgttggatgttctcaaggactacctg 431
Query: 906 aaatcttcaagctaatccttaggtataataaaagtccaaaaaaacta 952
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaatcttcaagctaatccttaggtataataaaagtccaaaaaaacta 478
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 166,111
Number of extensions: 3477
Number of successful extensions: 3477
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3477
Number of HSP's successfully gapped: 1
Length of query: 1420
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1403
Effective length of database: 8,119,229
Effective search space: 11391278287
Effective search space used: 11391278287
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)