BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21465 (UTR included)
(3352 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A2F11 900 0.0
BF01021A2F10 92 7e-18
BF01038A2H08 84 2e-15
BF01025A1H05 84 2e-15
BF14_1341_C1 78 1e-13
>BF01031A2F11
Length = 571
Score = 900 bits (454), Expect = 0.0
Identities = 478/486 (98%)
Strand = Plus / Plus
Query: 2397 agtgattatgtgcaagacaaaaagttacagattttagatttgcaattttattcttctgaa 2456
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 72 agtgattatgtgcaagacaagaagttacagattttagatttgcaattttattcttctgaa 131
Query: 2457 tatttatcggttctagttaaacatccaagcacaaacgatagctcaatatttatacaagtg 2516
|||||||| |||||||||||||||||||||| ||||||||||||||||||||| || |||
Sbjct: 132 tatttatcagttctagttaaacatccaagcataaacgatagctcaatatttatccaggtg 191
Query: 2517 ccaattaaaataatcatagaaaattccagtgaattcaatataaaaacgaaatcattggtt 2576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ccaattaaaataatcatagaaaattccagtgaattcaatataaaaacgaaatcattggtt 251
Query: 2577 ttcaatgaaaaaatactaaaagtgaatttatctccactcattgaatctggagtcttcaag 2636
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttcaatgaaaaaatattaaaagtgaatttatctccactcattgaatctggagtcttcaag 311
Query: 2637 gttctagaaaagatggatggttttcgcatagcagtttcgggtaatagaaaagttgctgtt 2696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gttctagaaaagatggatggttttcgcatagcagtttcgggtaatagaaaagttgctgtt 371
Query: 2697 gttttatcaaaaagtcataggaaagtgagagtttttgaaatggaaatagacggggaagag 2756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gttttatcaaaaagtcataggaaagtgagagtttttgaaatggaaatagacggggaagag 431
Query: 2757 gaggaagatgaaactctcgatacaacttcattatcccacacaactcatgatagtgtcaac 2816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gaggaagatgaaactctcgatacaacttcattatcccacacaactcatgatagtgtcaac 491
Query: 2817 agaagcactgaacatcaggaagacattatattttagtcataaataaaccgttaatacaaa 2876
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 492 agaagcactgaacatcaggaagacattatattttagtcataaataaactgttattacaaa 551
Query: 2877 aaaaaa 2882
||||||
Sbjct: 552 aaaaaa 557
Score = 115 bits (58), Expect = 5e-25
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 2374 tcacttcatgtctacttaatgacagtgattatgtgcaagacaaaaagttacagatttt 2431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 tcacttcatgtctacttaatgacagtgattatgtgcaagacaaaaagttacagatttt 19
>BF01021A2F10
Length = 792
Score = 91.7 bits (46), Expect = 7e-18
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 100 gctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaa 145
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaa 50
>BF01038A2H08
Length = 781
Score = 83.8 bits (42), Expect = 2e-15
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 96 taaagctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaa 145
|||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 530 taaaactcaaaaggactcgtatccagagccgtaaaaatatttacaaaaaa 481
>BF01025A1H05
Length = 756
Score = 83.8 bits (42), Expect = 2e-15
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 100 gctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaa 145
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 294 gctcaaaaggactcgtatccagagccctaaaaacatttacaaaaaa 249
>BF14_1341_C1
Length = 1009
Score = 77.8 bits (39), Expect = 1e-13
Identities = 46/47 (97%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 100 gctcaaaaggactcgtatccagagccgt-aaaaacatttacaaaaaa 145
|||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 945 gctcaaaaggactcgtatccagagccgtaaaaaacatttacaaaaaa 991
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 509,267
Number of extensions: 11421
Number of successful extensions: 11421
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 11420
Number of HSP's successfully gapped: 6
Length of query: 3352
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3334
Effective length of database: 8,109,745
Effective search space: 27037889830
Effective search space used: 27037889830
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)