BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21474 (UTR included)
(2275 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_432_C1 1816 0.0
>BF14_432_C1
Length = 995
Score = 1816 bits (916), Expect = 0.0
Identities = 936/943 (99%)
Strand = Plus / Plus
Query: 353 ctgtcagctgggaatatggaaaatggtgattattgaattgatgtgaattgtaatagaata 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ctgtcagctgggaatatggaaaatggtgattattgaattgatgtgaattgtaatagaata 112
Query: 413 ataaagtgcaaatttaacgtcgcttacaaggtcaaacaatagttgcaaattctgtttacc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ataaagtgcaaatttaacgtcgcttacaaggtcaaacaatagttgcaaattctgtttacc 172
Query: 473 aaatactaagaataaaaataggaacataatggcttcaccattagaacaattcgtgaataa 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aaatactaagaataaaaataggaacataatggcttcaccattagaacaattcgtgaataa 232
Query: 533 tgtaagaatatcatcagcatcaggaaattttcgtgagctttacgaaatgattggaaagtc 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tgtaagaatatcatcagcatcaggaaattttcgtgagctttacgaaatgattggaaagtc 292
Query: 593 ggaagaagtgttgcaacgaaacagtgtacatttaaatacagtgctagaaacccttgatat 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggaagaagtgttgcaacgaaacagtgtacatttaaatacagtgctagaaacccttgatat 352
Query: 653 acaacaacattcactcggtatcctagccgtgttacttgcaaaattttcatcaccacaggg 712
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 353 acaacaacattcactcggtatcctagccgtgttacttgcaaaattttcatcccctcaggg 412
Query: 713 taatgatgtagacagatctacaatgtaccaacaaatacatgattttattaccaattgcaa 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 taatgatgtagacagatctacaatgtaccaacaaatacatgattttattaccaattgcaa 472
Query: 773 tggagagcaggttcgctttggaccagatctatatgctgatttatgccatctcttgactga 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tggagagcaggttcgctttggaccagatctatatgctgatttatgccatctcttgactga 532
Query: 833 ccatctcatagagcaaaaacaacctattcgagggattgaaatactcaaaaaagctattag 892
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 533 ctatctcatagagcaaaaacaacctattagagggattgaaatactcaaaaaagctattag 592
Query: 893 aaaaatacaattgtttgactcgcagttaacatctatccacgctgacttgtgtcagttatg 952
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 593 aaaaatacaattgtttgactcgcagttaacatctatccatgctgacttgtgtcagttatg 652
Query: 953 tttactgtctaagtgtatgaagccggcactggagtttttagatactgatgttactggaat 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tttactgtctaagtgtatgaagccggcactggagtttttagatactgatgttactggaat 712
Query: 1013 tggatctgagctgggtggtgtgaatgattctaaacattttttactctactactattatgg 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tggatctgagctgggtggtgtgaatgattctaaacattttttactctactactattatgg 772
Query: 1073 aggaatgatatacacagctttgaaaaactatgacagagccttatatttctttgaagtagt 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 aggaatgatatacacagctttgaaaaactatgacagagccttatatttctttgaagtagt 832
Query: 1133 agttactgtcccatcgatggtagtgtctcatataatgctggaagcttataagaaatacat 1192
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 agttactgtcccatcaatggtagtgtctcatataatgctggaagcttataagaaatacat 892
Query: 1193 tttgatttcattaatcttacacgggaagatattaccaacaccaaagtacacatcccaagt 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 tttgatttcattaatcttacacgggaagatattaccaacaccaaagtacacatcccaagt 952
Query: 1253 tgtatttcgcttcttaaaaccattatctcttgcttatcttgaa 1295
||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 953 tgtatttcgcttcttaanaccattatctcttgcttatcttgaa 995
Score = 101 bits (51), Expect = 5e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 117 gatcagtttgggttgtgttacgaaggatttttataaaatatagataatttt 167
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gatcagtttgggttgtgttacgaaggatttttataaaatatagataatttt 52
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 287,269
Number of extensions: 5463
Number of successful extensions: 5463
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5463
Number of HSP's successfully gapped: 2
Length of query: 2275
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2258
Effective length of database: 8,119,229
Effective search space: 18333219082
Effective search space used: 18333219082
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)