BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21483 (UTR included)
(2361 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2486_C1 2101 0.0
>BF14_2486_C1
Length = 1084
Score = 2101 bits (1060), Expect = 0.0
Identities = 1078/1084 (99%)
Strand = Plus / Plus
Query: 919 acttcatgccgccctcggacgatactcacttcctggatgaagagattcctctcaaactgg 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttcatgccgccctcggacgatactcacttcctggatgaagagattcctctcaaactgg 60
Query: 979 agacggaagatgatgtgccactacaggagatacgagaaaataaattgaaagacctggcac 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agacggaagatgatgtgccactacaggagatacgagaaaataaattgaaagacctggcac 120
Query: 1039 tagacggcttcatgacagaatctaatcaagagaagaaagaaaagactaagaaaacgaaaa 1098
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 tagacggcttcatgacagaatctaatcaagagaagaaagagaagactaagaaaacgaaaa 180
Query: 1099 agaaagttaagacaagagtcacagataacataaagacagagaatgagctggagagcgaca 1158
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaaagttaagacaagagtcacggataacataaagacagagaatgagctggagagcgaca 240
Query: 1159 cacaagaggctaaaacaccaaagaaaagaaaccttcgcagaactatagacatagacgaga 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacaagaggctaaaacaccaaagaaaagaaaccttcgcagaactatagacatagacgaga 300
Query: 1219 acaagatacgagtcatcacactggacccggctgaacagctgaggcagagacaggcagaga 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 301 acaagatacgagtcatcacactggacccggctgaacagctgaggcagagacaggctgaga 360
Query: 1279 acgaggccacactgaagttcccgttccaatgccacctctgcttcaaaggtttcaactatg 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acgaggccacactgaagttcccgttccaatgccacctctgcttcaaaggtttcaactatg 420
Query: 1339 aagagaagctcaagaaccacatgttcaaacacagcccggctcgtggcagttacaagtgcg 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagagaagctcaagaaccacatgttcaaacacagcccggctcgtggcagttacaagtgcg 480
Query: 1399 aagtgtgcagtatgtatctacccacaccgtactcggcatctgtccacggtctcactcaca 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagtgtgcagtatgtatctacccacaccgtactcggcatctgtccacggtctcactcaca 540
Query: 1459 cactgaggtatgagtgtgtgcagtgcgggagacggatgacggacaggctggctatagtta 1518
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cactgaggtatgagtgtgtacagtgcgggagacggatgacggacaggctggctatagtta 600
Query: 1519 atcattacagatctcaacacgagggggtgctctcggtctacacttgtcacatatgcggga 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcattacagatctcaacacgagggggtgctctcggtctacacttgtcacatatgcggga 660
Query: 1579 aagtatcgaataatgataagactcaccgcggtcacatgaggaaccatcattctggctcca 1638
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 661 aagtatcgaataatgataagactcaccgcggtcacatgaggaaccatcactcgggctcca 720
Query: 1639 gagccgtctgcagggagtgcggcaagagcttcgtcaacaacgactccctcgccgagcaca 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gagccgtctgcagggagtgcggcaagagcttcgtcaacaacgactccctcgccgagcaca 780
Query: 1699 tgctcattcaccagggcatcaagaactacgagtgtccggagtgcggcaagaagttccgca 1758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgctcattcaccagggcatcaagaactacgagtgtccggagtgcggcaagaagttccgca 840
Query: 1759 cgaggaaccagatcaggcaccacctggtcaaacacagcgaccacaaggagttctactgtg 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cgaggaaccagatcaggcaccacctggtcaaacacagcgaccacaaggagttctactgtg 900
Query: 1819 tggagtgtgacgtcaggttcaagtcagctcacaccctccgccaacacttgaagaggacga 1878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tggagtgtgacgtcaggttcaagtcagctcacaccctccgccaacacttgaagaggacga 960
Query: 1879 cgaaacacaaagacaagaagagcctcaagttcgcgtgctctctgtgcccgaaacgcttcg 1938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgaaacacaaagacaagaagagcctcaagttcgcgtgctctctgtgcccgaaacgcttcg 1020
Query: 1939 acacgtcgacactgctggcgacacacacgcgcgtgcaacacgagggctcgcggccacacc 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 acacgtcgacactgctggcgacacacacgcgcgtgcaacacgagggctcgcggccacacc 1080
Query: 1999 gctg 2002
||||
Sbjct: 1081 gctg 1084
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,276
Number of extensions: 5048
Number of successful extensions: 5048
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5044
Number of HSP's successfully gapped: 1
Length of query: 2361
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2344
Effective length of database: 8,119,229
Effective search space: 19031472776
Effective search space used: 19031472776
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)