BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21505 (UTR included)
(2644 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 151 7e-36
BF14_729_C3 131 6e-30
BF01043B1E03 96 3e-19
BF01044B2E12 94 1e-18
BF01012A1B09 92 5e-18
BF01052B1F12 90 2e-17
BF01011A1H06 84 1e-15
BF01025B2E05 80 2e-14
BF01012A1E04 80 2e-14
BF14_729_C2 76 3e-13
BF01031B2E06 68 8e-11
BF01017A1F03 68 8e-11
BF01056A1B08 68 8e-11
>BF14_335_C2
Length = 1827
Score = 151 bits (76), Expect = 7e-36
Identities = 115/128 (89%)
Strand = Plus / Plus
Query: 175 cctaaccatatttgaaaagaacctactagggctgccttcgaagtacgttccaagaacgaa 234
|||||||| |||||||| ||||||||||| |||| ||||||||||||||| ||||| |||
Sbjct: 979 cctaaccaaatttgaaacgaacctactagagctgtcttcgaagtacgttcgaagaatgaa 1038
Query: 235 ttgatgtgagttctggacaggcccaagtcttttagcaggttgtagagagatttagccgtt 294
|| ||| |||||||||||||||||||| |||||| ||| |||||||||||||||| |||
Sbjct: 1039 ctggtgttagttctggacaggcccaagtattttagtaggctgtagagagatttagctgtt 1098
Query: 295 atacctct 302
||||||||
Sbjct: 1099 atacctct 1106
>BF14_729_C3
Length = 2041
Score = 131 bits (66), Expect = 6e-30
Identities = 84/90 (93%)
Strand = Plus / Minus
Query: 82 atttaaatgaaactagtattactctgatatactacgcggattttattatttaaaaactac 141
||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 1701 atttaaatgaagctagtattattcggatatactacgcggattttattatttaaaaactac 1642
Query: 142 acaatcctgacgtttcgtttactttgcagc 171
| ||||| ||||||||| ||||||||||||
Sbjct: 1641 ataatcccgacgtttcggttactttgcagc 1612
Score = 83.8 bits (42), Expect = 1e-15
Identities = 68/76 (89%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 302 taaaatccgcatagcatatccgaataatactagtttcatttaaatgaataaaactctcga 361
|||||||||| ||| |||||||||||||||||| ||||||||||||||| |||| |||
Sbjct: 1657 taaaatccgcgtagtatatccgaataatactagcttcatttaaatgaat---actcgcga 1713
Query: 362 aaatcttagatttcat 377
||||||||||| ||||
Sbjct: 1714 aaatcttagatctcat 1729
>BF01043B1E03
Length = 830
Score = 95.6 bits (48), Expect = 3e-19
Identities = 110/130 (84%), Gaps = 3/130 (2%)
Strand = Plus / Minus
Query: 172 ctacctaaccatatttgaaaagaacctactagggctgccttcgaagtacgttccaagaac 231
||||||||||| |||||||| |||||| || ||||||| | |||||||||||||||
Sbjct: 339 ctacctaaccaaatttgaaacaaaccta---ggcctgcctttgcagtacgttccaagaat 283
Query: 232 gaattgatgtgagttctggacaggcccaagtcttttagcaggttgtagagagatttagcc 291
|| ||||||| |||||||| ||||| ||||| ||| || ||||||||||||||| |||
Sbjct: 282 gatttgatgttagttctgggcaggctcaagtgtttcagtaggttgtagagagatgaagct 223
Query: 292 gttatacctc 301
||||||||||
Sbjct: 222 gttatacctc 213
>BF01044B2E12
Length = 823
Score = 93.7 bits (47), Expect = 1e-18
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 82 atttaaatgaaactagtattactctgatatactacgcggattttattatttaaaaactac 141
|||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||
Sbjct: 84 atttaaatgaaactagtatttttcggatttactacgcggattttattatttaannnctac 25
Query: 142 acaatcctgacgtttcgtttactt 165
| ||||| ||||||||| ||||||
Sbjct: 24 ataatcccgacgtttcggttactt 1
>BF01012A1B09
Length = 841
Score = 91.7 bits (46), Expect = 5e-18
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 82 atttaaatgaaactagtattactctgatatactacgcggattttattatttaaaaactac 141
||||||||||||||| ||| || |||| ||||||||||||||||||||| ||||||||
Sbjct: 736 atttaaatgaaactaatatatttcggatacactacgcggattttattattttaaaactac 795
Query: 142 acaatcctgacgtttcgtttactttgcagc 171
| ||||| ||||||||| ||||||| ||||
Sbjct: 796 ataatcccgacgtttcggttacttttcagc 825
Score = 71.9 bits (36), Expect = 5e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 302 taaaatccgcatagcatatccgaataatactagtttcatttaaatgaataaaactctcga 361
|||||||||| ||| |||||||| ||| |||||||||||||||||||||||||| |||
Sbjct: 780 taaaatccgcgtagtgtatccgaaatatattagtttcatttaaatgaataaaactcgcga 721
Query: 362 aaatcttagatttcat 377
| |||||||| ||||
Sbjct: 720 cagtcttagatctcat 705
>BF01052B1F12
Length = 785
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 317 atatccgaataatactagtttcatttaaatgaataaaactctcgaaaatcttagatttca 376
||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 357 atatccgaaaaatattagtttcatttaaatgaataaaactcgcgaaattcttagatttca 298
Query: 377 t 377
|
Sbjct: 297 t 297
>BF01011A1H06
Length = 739
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 318 tatccgaataatactagtttcatttaaatgaataaaactctcgaaaatcttagatttcat 377
|||||||| |||||||| ||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 547 tatccgaaaaatactagattcatttaaatgaataaaagtcgcgaaaatcttagatctcat 606
Query: 378 ta 379
||
Sbjct: 607 ta 608
>BF01025B2E05
Length = 759
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 328 atactagtttcatttaaatgaataaaactctcgaaaatcttagatttcatta 379
|||||||||||||||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 70 atactagtttcatttaaatgaataaaactcgcgaaagtcttagatctcatta 121
>BF01012A1E04
Length = 841
Score = 79.8 bits (40), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 302 taaaatccgcatagcatatccgaata-atactagtttcatttaaatgaataaaactctcg 360
|||||||||| ||| ||||||||| | ||| |||||||||||||||||||||||||| ||
Sbjct: 543 taaaatccgcgtagtatatccgaaaatatattagtttcatttaaatgaataaaactcgcg 602
Query: 361 aaaatcttagat 372
||| ||||||||
Sbjct: 603 aaagtcttagat 614
>BF14_729_C2
Length = 1289
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 318 tatccgaataatactagtttcatttaaatgaataaaactctcgaaaatcttagatttcat 377
|||||||||||| |||||||||||||||||| ||||||| ||||| |||||||| ||||
Sbjct: 615 tatccgaataattctagtttcatttaaatgattaaaactggcgaaagtcttagatctcat 674
Query: 378 ta 379
||
Sbjct: 675 ta 676
>BF01031B2E06
Length = 707
Score = 67.9 bits (34), Expect = 8e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 205 gctgccttcgaagtacgttccaagaacgaattgatgtgagttctggacaggcccaagtct 264
||||||||||||||| |||| || | | ||||||| || |||||||||||||||| |
Sbjct: 636 gctgccttcgaagtatgttctaaagattatttgatgttagatctggacaggcccaaggtt 577
Query: 265 tttagcaggttgtagagagatttagc 290
||||| ||||||| ||||||||||||
Sbjct: 576 tttagtaggttgtggagagatttagc 551
>BF01017A1F03
Length = 782
Score = 67.9 bits (34), Expect = 8e-11
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 198 tactagggctgc--cttcgaagtacgttccaagaacgaattgatgtgagttctggacagg 255
|||||||||||| ||| ||||||||||||||||| |||||||||| |||| ||||| ||
Sbjct: 184 tactagggctgcgccttggaagtacgttccaagaatgaattgatgttagttttggactgg 125
Query: 256 cccaagtct 264
| |||||||
Sbjct: 124 ctcaagtct 116
>BF01056A1B08
Length = 761
Score = 67.9 bits (34), Expect = 8e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 332 tagtttcatttaaatgaataaaactctcgaaaatcttagatttcat 377
|||||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 141 tagtttcatttaaatgaataaaactcgcgaaagtcttagatctcat 96
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,420
Number of extensions: 5334
Number of successful extensions: 5334
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 5330
Number of HSP's successfully gapped: 15
Length of query: 2644
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2627
Effective length of database: 8,119,229
Effective search space: 21329214583
Effective search space used: 21329214583
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)