BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21523 (UTR included)
(2482 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B2E01 1283 0.0
>BF01021B2E01
Length = 704
Score = 1283 bits (647), Expect = 0.0
Identities = 660/663 (99%), Gaps = 1/663 (0%)
Strand = Plus / Plus
Query: 519 cctaaattgagtccaataagggcgtaccaagttcttcttgcaaacacaatggaacctgaa 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 cctaaattgagtccaataagggcgtaccaagttcttcttgcaaacacaatggaacctgaa 73
Query: 579 gatacatacacaagtctttctgagtatcatgattatgaacctagtttagaattcgatgat 638
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gatacatacacgagtctttctgagtatcatgattatgaacctagtttagaattcgatgat 133
Query: 639 tctgaattgatacaggcttcaggattggcaccgttgccacctgaactgctcgacataccc 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tctgaattgatacaggcttcaggattggcaccgttgccacctgaactgctcgacataccc 193
Query: 699 gacgatctcctggagcggtcggctagcgacggaactattgaagagaattttgaaaaggaa 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gacgatctcctggagcggtcggctagcgacggaactattgaagagaattttgaaaaggaa 253
Query: 759 ctcgccaaaccacctcaagtatacgctgagatagctgcctcatcgttagacggcgattgc 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctcgccaaaccacctcaagtatacgctgagatagctgcctcatcgttagacggcgattgc 313
Query: 819 tgctgtgaactttctggcactggtttagtcgaggtggtgggcgatgacgaagtaggccgc 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgctgtgaactttctggcactggtttagtcgaggtggtgggcgatgacgaagtaggccgc 373
Query: 879 cgcatcatcgtggtgtcagcttgccgtcttccccccagtaaagacctgcatccagacgat 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cgcatcatcgtggtgtcagcttgccgtcttccccccagtaaagacctgcatccagacgat 433
Query: 939 ctcctaaggtacctagtgtgtactttggataaatatgtggagcaagattatagtgttgtg 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctcctaaggtacctagtgtgtactttggataaatatgtggagcaagattatagtgttgtg 493
Query: 999 tattttcattatggtctaacaagcaagaacaagccacctctctcttggctatggaaagct 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tattttcattatggtctaacaagcaagaacaagccacctctctcttggctatggaaagct 553
Query: 1059 tacaaagctttcgaaagaaaatacaagaaaaatcttaaagcactatatttagtgcatcct 1118
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 554 tacaaagctttcgaaagaaaatacgagaaaaatcttaaagcactatatttagtgcatcct 613
Query: 1119 acaaatttcatacgcattgtctggcaaatgcttaaaccagcaataag-cgtgaaatttgg 1177
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 614 acaaatttcatacgcattgtctggcaaatgcttaaaccagcaataagacgtgaaatttgg 673
Query: 1178 cag 1180
|||
Sbjct: 674 cag 676
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,859
Number of extensions: 4755
Number of successful extensions: 4755
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4754
Number of HSP's successfully gapped: 1
Length of query: 2482
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2465
Effective length of database: 8,119,229
Effective search space: 20013899485
Effective search space used: 20013899485
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)