BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21525 (UTR included)
(4015 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A1D07 1518 0.0
BF01004X1F08 1384 0.0
BF01032A1G03 385 e-106
>BF01060A1D07
Length = 766
Score = 1518 bits (766), Expect = 0.0
Identities = 766/766 (100%)
Strand = Plus / Plus
Query: 2810 caacaacactaagaatgctgcaccccccgcggctcctcccccgcccccgcctgctgattt 2869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caacaacactaagaatgctgcaccccccgcggctcctcccccgcccccgcctgctgattt 60
Query: 2870 gggtgactctatggacagtcaaccagacttcagctttaaccttgaacttagtaggaacca 2929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtgactctatggacagtcaaccagacttcagctttaaccttgaacttagtaggaacca 120
Query: 2930 agttgagcactacggttcacaattcggcgaagagcactctgttaacccgccagtaaccat 2989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttgagcactacggttcacaattcggcgaagagcactctgttaacccgccagtaaccat 180
Query: 2990 agtcgttgatgaggttgtcggtgatatgtttgaagaagaggaagtggaggagttgccgcc 3049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtcgttgatgaggttgtcggtgatatgtttgaagaagaggaagtggaggagttgccgcc 240
Query: 3050 cgctccggtaccaaaacctgcaccgcccaaagttgaaattacagacgatgaatgtggcct 3109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgctccggtaccaaaacctgcaccgcccaaagttgaaattacagacgatgaatgtggcct 300
Query: 3110 tggggtagcgcaaatagttatcacagctgctacccctatgatggaggagccagaccaacc 3169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggggtagcgcaaatagttatcacagctgctacccctatgatggaggagccagaccaacc 360
Query: 3170 atttccaccaactgagcccgagcctgaacccgaacccgagcgcgagactgaaaacactaa 3229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atttccaccaactgagcccgagcctgaacccgaacccgagcgcgagactgaaaacactaa 420
Query: 3230 cgcacctgagcgtattgaggaaaacgatgacgaagaatcttctctttctgaacaaaccgc 3289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgcacctgagcgtattgaggaaaacgatgacgaagaatcttctctttctgaacaaaccgc 480
Query: 3290 tgtttgtctccgcgattctgaagaaggtcacgctgattcagccccacacccgcagtcaag 3349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtttgtctccgcgattctgaagaaggtcacgctgattcagccccacacccgcagtcaag 540
Query: 3350 ctcaacagcttctgaaggagaatcgggggcttcggttgcctcgggtccccctaccgctcc 3409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcaacagcttctgaaggagaatcgggggcttcggttgcctcgggtccccctaccgctcc 600
Query: 3410 acagtctcccccttcagcccctcgtgccgggcgcgcctccatcccagatgaattagaacc 3469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acagtctcccccttcagcccctcgtgccgggcgcgcctccatcccagatgaattagaacc 660
Query: 3470 tgcgcaactagcaaggctcacaaatcttaaggagtccaacgcctagacctatgcttctcg 3529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgcgcaactagcaaggctcacaaatcttaaggagtccaacgcctagacctatgcttctcg 720
Query: 3530 actgatttactatcattctagatcgtcattcttctacttggcagta 3575
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 actgatttactatcattctagatcgtcattcttctacttggcagta 766
>BF01004X1F08
Length = 767
Score = 1384 bits (698), Expect = 0.0
Identities = 710/714 (99%)
Strand = Plus / Plus
Query: 3028 aggaagtggaggagttgccgcccgctccggtaccaaaacctgcaccgcccaaagttgaaa 3087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 aggaagtggaggagttgccgcccgctccggtaccaaaacctgcaccgcccaaagttgaaa 113
Query: 3088 ttacagacgatgaatgtggccttggggtagcgcaaatagttatcacagctgctaccccta 3147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ttacagacgatgaatgtggccttggggtagcgcaaatagttatcacagctgctaccccta 173
Query: 3148 tgatggaggagccagaccaaccatttccaccaactgagcccgagcctgaacccgaacccg 3207
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 174 tgatggaggagtcagaccaaccatttccaccaactgagcctgagcctgaacccgaacccg 233
Query: 3208 agcgcgagactgaaaacactaacgcacctgagcgtattgaggaaaacgatgacgaagaat 3267
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 agcgcgaggctgaaaacactaacgcacctgagcgtattgaggaaaacgatgacgaagaat 293
Query: 3268 cttctctttctgaacaaaccgctgtttgtctccgcgattctgaagaaggtcacgctgatt 3327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cttctctttctgaacaaaccgctgtttgtctccgcgattctgaagaaggtcacgctgatt 353
Query: 3328 cagccccacacccgcagtcaagctcaacagcttctgaaggagaatcgggggcttcggttg 3387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 cagccccacacccgcagtcaagctcaacagcttctgaaggagaatcgggggcttcggttg 413
Query: 3388 cctcgggtccccctaccgctccacagtctcccccttcagcccctcgtgccgggcgcgcct 3447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cctcgggtccccctaccgctccacagtctcccccttcagcccctcgtgccgggcgcgcct 473
Query: 3448 ccatcccagatgaattagaacctgcgcaactagcaaggctcacaaatcttaaggagtcca 3507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ccatcccagatgaattagaacctgcgcaactagcaaggctcacaaatcttaaggagtcca 533
Query: 3508 acgcctagacctatgcttctcgactgatttactatcattctagatcgtcattcttctact 3567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acgcctagacctatgcttctcgactgatttactatcattctagatcgtcattcttctact 593
Query: 3568 tggcagtatttactaagaatacgttttttttttatgtctcaaagattttctcaggcaacg 3627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tggcagtatttactaagaatacgttttttttttatgtctcaaagattttctcaggcaacg 653
Query: 3628 aaaggactacaacctttttaacattcatttcacacaaaaattatatttctatcatagatc 3687
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aaaggactacaaactttttaacattcatttcacacaaaaattatatttctatcatagatc 713
Query: 3688 gtttctcacatatggatattttgtatttataatcactttactttaaaaatcata 3741
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gtttctcacatatggatattttgtatttataatcactttactttaaaaatcata 767
>BF01032A1G03
Length = 721
Score = 385 bits (194), Expect = e-106
Identities = 197/198 (99%)
Strand = Plus / Plus
Query: 2797 ttttcggtgagaacaacaacactaagaatgctgcaccccccgcggctcctcccccgcccc 2856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ttttcggtgagaacaacaacactaagaatgctgcaccccccgcggctcctcccccgcccc 204
Query: 2857 cgcctgctgatttgggtgactctatggacagtcaaccagacttcagctttaaccttgaac 2916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cgcctgctgatttgggtgactctatggacagtcaaccagacttcagctttaaccttgaac 264
Query: 2917 ttagtaggaaccaagttgagcactacggttcacaattcggcgaagagcactctgttaacc 2976
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttagtacgaaccaagttgagcactacggttcacaattcggcgaagagcactctgttaacc 324
Query: 2977 cgccagtaaccatagtcg 2994
||||||||||||||||||
Sbjct: 325 cgccagtaaccatagtcg 342
Score = 73.8 bits (37), Expect = 2e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 2994 gttgatgaggttgtcggtgatatgtttgaagaagagg 3030
|||||||||||||||||||||||||||||||||||||
Sbjct: 543 gttgatgaggttgtcggtgatatgtttgaagaagagg 579
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 435,672
Number of extensions: 9106
Number of successful extensions: 9106
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 9106
Number of HSP's successfully gapped: 4
Length of query: 4015
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3997
Effective length of database: 8,109,745
Effective search space: 32414650765
Effective search space used: 32414650765
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)