BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21526 (UTR included)
(2614 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3327_C1 1739 0.0
>BF14_3327_C1
Length = 903
Score = 1739 bits (877), Expect = 0.0
Identities = 895/903 (99%)
Strand = Plus / Plus
Query: 381 ttgacaactggctctggcttttttgagatcgttatacttttattattttaagtaaccatt 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgacaactggctctggcttttttgagatcgttatacttttattattttaagtaaccatt 60
Query: 441 tgactggaatttaacaaatttggttttctgttaaattaattaatcatatagtcatgaaaa 500
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgactggaaattaacaaatttggttttctgttaaattaattaatcatatagtcatgaaaa 120
Query: 501 atgattgcgtcacgtatgaaggccttatttatattttttgttgttgcaccgtctgttaca 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgattgcgtcacgtatgaaggccttatttatattttttgttgttgcaccgtctgttaca 180
Query: 561 cccaggatacacaagctgtctctttcggatgatgagcgtcattatgtagatcttactacc 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccaggatacacaagctgtctctttcggatgatgagcgtcattatgtagatcttactacc 240
Query: 621 tttggtttctaccaaggaggcattttagatgttcaaatggtaaactttcgattaccatct 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttggtttctaccaaggaggcattttagatgttcaaatggtaaactttcgattaccatct 300
Query: 681 ggaccaatttatggcgagtatggatttaccttggaccgcacagcaagtgatgctatcaac 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaccaatttatggcgagtatggatttaccttggaccgcacagcaagtgatgctatcaac 360
Query: 741 ccttatttggaagttcattcggacacatgtatattaaaaggtgttgagagtagcagtacc 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccttatttggaagttcattcggacacatgtatattaaaaggtgttgagagtagcagtacc 420
Query: 801 ttgttatcaccacatcatccggcgattgtctttttgaaaatggattttgataaccttagg 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgttatcaccacatcatccggcgattgtctttttgaaaatggattttgataaccttagg 480
Query: 861 ttgaacataacttgcgaaggcgaagttgttgctctgcatctttacccaaatcgatctatg 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgaacataacttgcgaaggcgaagttgttgctctgcatctttacccaaatcgatctatg 540
Query: 921 atacctatcgacaggacaaagagacaatcgcaatatatgtttgtgaataggcggcgaaga 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atacctatcgacaggacaaagagacaatcgcaatatatgtttgtgaataggcggcgaaga 600
Query: 981 tcactcgatgatgagttggatgtgaaagttcttggtccacaatgctcgcatgctgtccta 1040
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 601 tcactcgatgatgagttggatgtgaaagttcttggtccacaatgctcacatgctgtccta 660
Query: 1041 cccataacaaaagagacacgcgacggttacgactattacaatacaagttttgcaatgtat 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cccataacaaaagagacacgcgacggttacgactattacaatacaagttttgcaatgtat 720
Query: 1101 gtggcatctgataaagaagaaggtctatacaatttatatttccacaactgtcctcgagaa 1160
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtggcatctgataaagaagaaggtctatacaatttatatttccacaactgtcctcgagan 780
Query: 1161 gataccggtgttgctacacctattaatgttatgattgaaatatatgaaagcaacgatgga 1220
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 781 nataccggtgttgctacacctattaatgttatgattgaaatatatnnnngcaacgatgga 840
Query: 1221 aacttcttatcagctggcgaaatgccgcttccagctctatacagcatgatgtcactaata 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aacttcttatcagctggcgaaatgccgcttccagctctatacagcatgatgtcactaata 900
Query: 1281 ttc 1283
|||
Sbjct: 901 ttc 903
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 360,322
Number of extensions: 8841
Number of successful extensions: 8841
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8841
Number of HSP's successfully gapped: 1
Length of query: 2614
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2597
Effective length of database: 8,119,229
Effective search space: 21085637713
Effective search space used: 21085637713
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)