BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21569 (UTR included)
(2760 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A2C11 1166 0.0
>BF01047A2C11
Length = 805
Score = 1166 bits (588), Expect = 0.0
Identities = 621/633 (98%)
Strand = Plus / Plus
Query: 12 caggtcgtaagtcgtgcaccaacgataaaaatgaacagggactgtgtgtcaggaaggcgt 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 caggtcgtaagtcgtgcaccaacgataaaaatgaacagggactgtgtgtcaggaaggcgt 232
Query: 72 cctgcgtgaacgctgtgcagacagttgaccccacaatcaatttcaatctcagggaacgcg 131
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 233 cctgcgtgaacgctgttcagacagttgaccccacaatcaatttcaatctcagggaacgtg 292
Query: 132 agttatgccactacttagagacctgctgcttggagaagaacatcaaaaagaaagctgtga 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 agttatgccactacttagagacctgctgcttggagaagaacatcaaaaagaaagctgtga 352
Query: 192 aaccgattcgtcagcaaaacaccggctgcggctggagcaaccctggcgccaacgtgttca 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aaccgattcgtcagcaaaacaccggctgcggctggagcaaccctggcgccaacgtgttca 412
Query: 252 gggagaagaactcgccaacaggtttcgctgattacggggaattcccgtggatggtagctt 311
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 413 gggagaagaactcgccaacaggtttcgctgattacggggaattcccgtggatggtagcct 472
Query: 312 taatccagaagggtaccggaaaagatggcttcaacgaaagttacgctggcggaggagttc 371
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 473 taatccagaagggtactggaaaagatggcttcaacgaaagttacgctggcggaggggttc 532
Query: 372 tcatccatccgtcagtagtcatgacagcggcgcataaagtacaaaatttcaaaccggaag 431
||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||
Sbjct: 533 tcatccatccgtcagtagtcatgacagcggcacacaaagtacaaagtttcaaaccggaag 592
Query: 432 tggtaaaaatccgagccggcgaatgggacactcaaacagacgcggaagtggagccctatc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tggtaaaaatccgagccggcgaatgggacactcaaacagacgcggaagtggagccctatc 652
Query: 492 aagagagagacgtctctaagatcattatacacgaaggtcacaatgaaaaacagcacaacg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 aagagagagacgtctctaagatcattatacacgaaggtcacaatgaaaaacagcacaacg 712
Query: 552 atgtggcgcttctgattctgaagtcgccagtggatctgtcagatgctcctcacatcgctg 611
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 atgtggcgcttctcattctgaagtcgccagtggatctgtcagatgctcctcacatcgctg 772
Query: 612 taggttgtctagcatctcgtctccccccacctg 644
| |||||||||||||||||||||||||||||
Sbjct: 773 tnnnttgtctagcatctcgtctccccccacctg 805
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 249,659
Number of extensions: 4077
Number of successful extensions: 4077
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4077
Number of HSP's successfully gapped: 1
Length of query: 2760
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2743
Effective length of database: 8,119,229
Effective search space: 22271045147
Effective search space used: 22271045147
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)