BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21573 (UTR included)
(3619 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B1H08 1350 0.0
>BF01047B1H08
Length = 735
Score = 1350 bits (681), Expect = 0.0
Identities = 712/721 (98%), Gaps = 1/721 (0%)
Strand = Plus / Plus
Query: 2585 caacaagttattgcgacggcaagttgtcagttatggtggtgctaataaagatgcgcttgt 2644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 caacaagttattgcgacggcaagttgtcagttatggtggtgctaataaagatgcgcttgt 71
Query: 2645 tcttagttgtgcaggtgatatagtggatgtggatgtgccagatgggaccactgagaggac 2704
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tcttagttgcgcaggtgatatagtggatgtggatgtgccagatgggaccactgagaggac 131
Query: 2705 agataaacatgaagataatatgcagactcagaataccgcaaatttctgcacactcccaag 2764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agataaacatgaagataatatgcagactcagaataccgcaaatttctgcacactcccaag 191
Query: 2765 aaaaccaagggcgccaacacacacttaccatacgatcgtgtttgagaagggtcatggaaa 2824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaaaccaagggcgccaacacacacttaccatacgatcgtgtttgagaagggtcatggaaa 251
Query: 2825 gaagcccttaggatttacgatagttggtggacgggattcgcctcggggtcccttgggaat 2884
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 252 gaagcccttaggatttacgatagttggtggacgggattctcctcggggtcccttgggaat 311
Query: 2885 tttcataaaaagtattctaccacagggacaggcgatagacgacggaagattgaacgctgg 2944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tttcataaaaagtattctaccacagggacaggcgatagacgacggaagattgaacgctgg 371
Query: 2945 tgacgaagttttagcagtgaacggtcaggcgtgtcatgaattagcccacgtggaagctct 3004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgacgaagttttagcagtgaacggtcaggcgtgtcatgaattagcccacgtggaagctct 431
Query: 3005 ggccctcttcaaagcagttcgaagtgggaccatcgagctaagagtttgccgcagaattaa 3064
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggccctcttcaaagctgttcgaagtgggaccatcgagctaagagtttgccgcagaattaa 491
Query: 3065 aaaccaatctaccaaagcaaaatcgtgcacagatctactgaatgacgacgattgaaaaat 3124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 492 aaaccaatctaccaaagcaaaatcgtgcacagatcttctgaatgacgacgattgaaaaat 551
Query: 3125 ttaataattcttgtgttatgatgtcattcatcagatgggttgacctttacaatgtaataa 3184
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 552 ttaataattattgtgttatgatgtcattcatcagatgggttgaactttacaatgtaataa 611
Query: 3185 ttaaaacatgaaaatgaaattgtacaaaaaatggtgccattcaaatttaccatttcttga 3244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ttaaaacatgaaaatgaaattgtacaaaaaatggtgccattcaaatttaccatttcttga 671
Query: 3245 gtagttaaaatttttgaccaacggattctgc-aaaatagtgatttttgatatatgctaaa 3303
||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 672 gtaattaaaattgttgaccaacggattctgcaaaaatagtgatttttgatatatgctaaa 731
Query: 3304 g 3304
|
Sbjct: 732 g 732
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 396,539
Number of extensions: 6842
Number of successful extensions: 6842
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6841
Number of HSP's successfully gapped: 1
Length of query: 3619
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3601
Effective length of database: 8,109,745
Effective search space: 29203191745
Effective search space used: 29203191745
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)