BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21574 (UTR included)
(4090 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A2D03 745 0.0
>BF01026A2D03
Length = 396
Score = 745 bits (376), Expect = 0.0
Identities = 391/396 (98%)
Strand = Plus / Plus
Query: 1823 taatgtcaacaaagttcaagtacccatgcgtagaagttctactccgtgtgctttatttcc 1882
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 taatgtcaacaaagttcaggtacccatgcgtagaatttctactccgtgtgctttatttcc 60
Query: 1883 cattgaaaaaaagtcatactatgagtacgaaaatgaaaatagagatgacaatcaatatca 1942
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cattgaaaaaaaatcatactatgagtacgaaaatgaaaatagagatgacaatcaatatca 120
Query: 1943 aaataacgattcaaatcttatcatcatcgattataatgatggaaaaccaccgccactgcc 2002
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaataacgattcaaatcatatcatcatcgattataatgatggaaaaccaccgccactgcc 180
Query: 2003 aaagaaaacagtccataaaaagacaccatatatttataaaaccatcactttagatgaacg 2062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagaaaacagtccataaaaagacaccatatatttataaaaccatcactttagatgaacg 240
Query: 2063 tgttcaaacaagaaaaataaaattgctacagtcacaattagtttctgttgatcactcgtc 2122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttcaaacaagaaaaataaaattgctacagtcacaattagtttctgttgatcactcgtc 300
Query: 2123 tacgccgaatctcagtgataactctttaaatacttctaaggaattgaacaatgtacaaag 2182
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 tacgccgaatctcagtgataactctttaaatacttctaaggaattaaacaatgtacaaag 360
Query: 2183 aattcatgagacagatatacttggaaggggtccatg 2218
||||||||||||||||||||||||||||||||||||
Sbjct: 361 aattcatgagacagatatacttggaaggggtccatg 396
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 478,114
Number of extensions: 8931
Number of successful extensions: 8931
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8931
Number of HSP's successfully gapped: 1
Length of query: 4090
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4072
Effective length of database: 8,109,745
Effective search space: 33022881640
Effective search space used: 33022881640
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)