BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21575 (UTR included)
(1786 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B2D06 696 0.0
>BF01039B2D06
Length = 810
Score = 696 bits (351), Expect = 0.0
Identities = 351/351 (100%)
Strand = Plus / Plus
Query: 354 tcaggtattctgtacacagcgcaggatctcctgctgttctatcccaatgaccctcctgac 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tcaggtattctgtacacagcgcaggatctcctgctgttctatcccaatgaccctcctgac 519
Query: 414 tcccgtgcctttgtgctgcaacccagcaactataagctaccctatgagagtgtcaagatt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tcccgtgcctttgtgctgcaacccagcaactataagctaccctatgagagtgtcaagatt 579
Query: 474 aaaacccgggatggatataagattcacatgttcttcatacgacaactcacaaacagcaac 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aaaacccgggatggatataagattcacatgttcttcatacgacaactcacaaacagcaac 639
Query: 534 cacaaacccactatgatcttcttccatggaaatgcagggaacatgggtcaaagattgtcc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cacaaacccactatgatcttcttccatggaaatgcagggaacatgggtcaaagattgtcc 699
Query: 594 aatgtgtcgggtttttatcacaaattaggaataaatattcttttggtagaatatagaggt 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 aatgtgtcgggtttttatcacaaattaggaataaatattcttttggtagaatatagaggt 759
Query: 654 tacggcctgtctgaaggaacaccctcggaacaagggctgtatattgatgct 704
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 tacggcctgtctgaaggaacaccctcggaacaagggctgtatattgatgct 810
Score = 188 bits (95), Expect = 2e-47
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 1 gtgtctacgctgactttatgctcttgttttgttatattttggttatatggatttttcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtgtctacgctgactttatgctcttgttttgttatattttggttatatggatttttcctc 432
Query: 61 gccgttaccgccttcaccctgggtatatcaggtat 95
|||||||||||||||||||||||||||||||||||
Sbjct: 433 gccgttaccgccttcaccctgggtatatcaggtat 467
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,240
Number of extensions: 4528
Number of successful extensions: 4528
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4528
Number of HSP's successfully gapped: 2
Length of query: 1786
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1769
Effective length of database: 8,119,229
Effective search space: 14362916101
Effective search space used: 14362916101
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)