BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21577 (UTR included)
(2242 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A2C03 1068 0.0
>BF01041A2C03
Length = 776
Score = 1068 bits (539), Expect = 0.0
Identities = 545/547 (99%)
Strand = Plus / Plus
Query: 1696 tcgcctccatgttctccgactgcgactcctcctccgggaacaactagaagacacacactt 1755
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 tcgcctccatgttctccgactgcgactcctcctccgggaacaactagaacacacacactt 60
Query: 1756 accactgagtgcatgactcgtggccgtgtggcgtgtggcgtgtggcgtgtgaagggtcgt 1815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accactgagtgcatgactcgtggccgtgtggcgtgtggcgtgtggcgtgtgaagggtcgt 120
Query: 1816 gtctgtagtctaacgctagctggttgttaatacatatattaaataataattatacgataa 1875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtctgtagtctaacgctagctggttgttaatacatatattaaataataattatacgataa 180
Query: 1876 gagacagggacaagagaattgagacggatcttatgtatgtatataaataaatattatata 1935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagacagggacaagagaattgagacggatcttatgtatgtatataaataaatattatata 240
Query: 1936 gtgacgtgtgttgtgagtaacgaacgaatgaatgaatgaatgaatggaccccaacggacc 1995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgacgtgtgttgtgagtaacgaacgaatgaatgaatgaatgaatggaccccaacggacc 300
Query: 1996 gagcggaaccaggagactgattaatgaagaaggtttgagatcaggcgtgaggcggagtta 2055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagcggaaccaggagactgattaatgaagaaggtttgagatcaggcgtgaggcggagtta 360
Query: 2056 gttcatagcaggtacagtgatcgaagcgaccacaaaatgtggcgtgagaactgacggttt 2115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttcatagcaggtacagtgatcgaagcgaccacaaaatgtggcgtgagaactgacggttt 420
Query: 2116 aaattattaggctgtgttctgttttataaattgtctgtaatcaatatagacgtctgagaa 2175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaattattaggctgtgttctgttttataaattgtctgtaatcaatatagacgtctgagaa 480
Query: 2176 gtcgttcctatatcagttacagaaatgttgatcgaagccttgaatcgcagttcaccacag 2235
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 481 gtcgttcctatatcagttacagaaatgttgatcgaagccttgaatcacagttcaccacag 540
Query: 2236 ctactgg 2242
|||||||
Sbjct: 541 ctactgg 547
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 274,661
Number of extensions: 6513
Number of successful extensions: 6513
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6505
Number of HSP's successfully gapped: 1
Length of query: 2242
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2225
Effective length of database: 8,119,229
Effective search space: 18065284525
Effective search space used: 18065284525
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)