BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21584 (UTR included)
(1987 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_778_C1 1005 0.0
>BF14_778_C1
Length = 1542
Score = 1005 bits (507), Expect = 0.0
Identities = 513/515 (99%)
Strand = Plus / Plus
Query: 583 gaaaatacgacgaaagccgtggaatagaactggtgaaggaaaccctgaaacgtggcatca 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gaaaatacgacgaaagccgtggaatagaactggtgaaggaaaccctgaaacgtggcatca 479
Query: 643 actacctggagacaggaccctggtacggccaaggcagttcagagaggactattggaaaag 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 actacctggagacaggaccctggtacggccaaggcagttcagagaggactattggaaaag 539
Query: 703 ctctcagagacgtgcccaggaacagtttttacatcggaagtaaagtaggccggtatgaga 762
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 540 ctctcagagacgtgcccaggaatagtttttacatcggaagtaaagtaggccggtatgaga 599
Query: 763 aagaaacacacagaatgtttgacttctcagcggagaagacggaggctggagtgagcagca 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aagaaacacacagaatgtttgacttctcagcggagaagacggaggctggagtgagcagca 659
Query: 823 ccctcgagcgactggggctcgagtacgtggacttgatacaggtccacgacgctacgttcg 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ccctcgagcgactggggctcgagtacgtggacttgatacaggtccacgacgctacgttcg 719
Query: 883 cgccggacctgtccgtcgttctgaaggagaccttgccgaccctggcgcgagtggtgtccg 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cgccggacctgtccgtcgttctgaaggagaccttgccgaccctggcgcgagtggtgtccg 779
Query: 943 agggccgcgcgaggtacatcggcctcgccgactacgacctggacctcatgcaggagatcg 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 agggccgcgcgaggtacatcggcctcgccgactacgacctggacctcatgcaggagatcg 839
Query: 1003 tcgaggagtcccacgtcaagatctccaccatctcatcttacgccaagtccacgttattcg 1062
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 840 tcgaggagtcccacgtcaagatctccaccatctcatcttacgcctagtccacgttattcg 899
Query: 1063 acaaccgtcttcagaactacatcggatactttaag 1097
|||||||||||||||||||||||||||||||||||
Sbjct: 900 acaaccgtcttcagaactacatcggatactttaag 934
Score = 190 bits (96), Expect = 6e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1096 agagtaagggtgtgggtgtgatcaacgcggcggccaccggcatgggcctgctgtgtaact 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 agagtaagggtgtgggtgtgatcaacgcggcggccaccggcatgggcctgctgtgtaact 1506
Query: 1156 cggggccgcagccctggcaccccgccagcgacgaca 1191
||||||||||||||||||||||||||||||||||||
Sbjct: 1507 cggggccgcagccctggcaccccgccagcgacgaca 1542
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,807
Number of extensions: 5034
Number of successful extensions: 5034
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5034
Number of HSP's successfully gapped: 2
Length of query: 1987
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1970
Effective length of database: 8,119,229
Effective search space: 15994881130
Effective search space used: 15994881130
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)