BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21593 (UTR included)
(2374 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2011_C1 3400 0.0
>BF14_2011_C1
Length = 1922
Score = 3400 bits (1715), Expect = 0.0
Identities = 1748/1759 (99%)
Strand = Plus / Plus
Query: 487 aaaagtgagtcgtcatggatgaaagaggagagacggttcatctgcaggcagttcctgact 546
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 164 aaaagtgagtcgtcatggatgaaaggggagagacggttcatctgcaggcagttcctgact 223
Query: 547 ccgtcgagagctcgtcgccattgcccgccaaagaggataccgatgaggactacgacccgc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ccgtcgagagctcgtcgccattgcccgccaaagaggataccgatgaggactacgacccgc 283
Query: 607 acgagcatagacagttggcaaaaccaacaaacaacgcggagacgttgattcatctgctga 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 acgagcatagacagttggcaaaaccaacaaacaacgcggagacgttgattcatctgctga 343
Query: 667 agtgtagtttggggactggcatcctagcgatgccgcaggccttcgcccgagctggtctcg 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agtgtagtttggggactggcatcctagcgatgccgcaggccttcgcccgagctggtctcg 403
Query: 727 tcactggcatcttagccactgtgatagttggagtcatagtcacgcactgtctccacgttt 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tcactggcatcttagccactgtgatagttggagtcatagtcacgcactgtctccacgttt 463
Query: 787 tggtgaggtctcaataccaagcctgcaagcgtctccgggtgcctctgttgacgtatcccg 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tggtgaggtctcaataccaagcctgcaagcgtctccgggtgcctctgttgacgtatcccg 523
Query: 847 agtctatgtcgacagcgttaggctgcgggccggatttccttcgtaagttcgcgcggccct 906
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 524 agtctatgtcgacagcgttgggctgcgggccggacttccttcgtaagttcgcgcggccct 583
Query: 907 ccgccctcgccgtggacatcttcctcgtggtctaccagctgggaatctgctgcgtctaca 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ccgccctcgccgtggacatcttcctcgtggtctaccagctgggaatctgctgcgtctaca 643
Query: 967 ttgtgttcatcgcagacaacataaagagagtttgcgacccatattacaacatggcggtgg 1026
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ttgtgttcatcgcagacaatataaagagagtttgcgacccatattacaacatggcggtgg 703
Query: 1027 agttgcatatgctgataattctgctgccactgatagccttcaaccttatcccgagcctta 1086
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 704 agttgcatatgctgataattctgctgccattgatagccttcaaccttatcccgagcctta 763
Query: 1087 agctgttggcgcctttctccgccctggccaatgtcatgacctttgttggtttgggtattg 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 agctgttggcgcctttctccgccctggccaatgtcatgacctttgttggtttgggtattg 823
Query: 1147 tggtgtactacctgctttctggcgagaagaagtcagattcacccctggacctgtggggat 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 tggtgtactacctgctttctggcgagaagaagtcagattcacccctggacctgtggggat 883
Query: 1207 ctacagcgacttttccgctgttcttcggaactattctttttgccctcaccgccgtcggtg 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 ctacagcgacttttccgctgttcttcggaactattctttttgccctcaccgccgtcggtg 943
Query: 1267 tggtgataacggtggaaaacaatatgaagacccccaaatccttcggcactccttgcggcg 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 tggtgataacggtggaaaacaatatgaagacccccaaatccttcggcactccttgcggcg 1003
Query: 1327 tgatgaatacaggaatgttcatcattgtgctgctgtacgtggcggtaggggcattgggat 1386
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1004 tgatgaatacaggaatgttcatcattgtgcttctgtacgtggcggtaggggcattgggat 1063
Query: 1387 acgtattctgcgtggacaagtgcagcgactccataacactggatctgcctcagaacagcc 1446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 acgtattctgcgtggacaagtgcagcgactccataacactggatctgcctcagaacagcc 1123
Query: 1447 cactggcgaccagcgctatagtaatgttcgcggtggcaattttcatcagctacggcctcc 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 cactggcgaccagcgctatagtaatgttcgcggtggcaattttcatcagctacggcctcc 1183
Query: 1507 actgctacgttcccgtggaggtgctatggaagggatacgtcctgcctcgcgttgaacgct 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 actgctacgttcccgtggaggtgctatggaagggatacgtcctgcctcgcgttgaacgct 1243
Query: 1567 cagcgccaaacaaaacacgattctatgaatacgctctcagagtatctctttgtttgctca 1626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1244 cagcgccaaacaaaacacgattctatgaatacgctctcagagtatctctttgtttgctca 1303
Query: 1627 cattcgtgctggcggtggcggtgccacgtctcggcttgttcatatcacttttcggagctc 1686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1304 cattcgtgctggcggtggcggtgccacgtctcggcttgttcatatcacttttcggagctc 1363
Query: 1687 tctgtctgtcggcgctcgggatatgttttccagctttgatggaagtctgtctcagcttcc 1746
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1364 tctgtctgtcggcgctcgggatatgttttccagctttgatggaagtctgtctcagcttca 1423
Query: 1747 cgcagcgagccagcagatccaggagcctgctgttcactaaggacgtcatcctcttcataa 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 cgcagcgagccagcagatccaggagcctgctgttcactaaggacgtcatcctcttcataa 1483
Query: 1807 tcggcatcgtgggtctcatagcggggacctatacagctctacatagcatcgtccgctcgt 1866
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1484 tcggcatcgtgggtctcatagcggggacctatacagctctacatagcatcgtccgctctt 1543
Query: 1867 tcacatagacactacgattaaactgactcccacgcccaaagtcgatttatttatttaaag 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 tcacatagacactacgattaaactgactcccacgcccaaagtcgatttatttatttaaag 1603
Query: 1927 tatttataaatatttatctattatattgttacgtttatttaagtttttgaaagaaatggt 1986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 tatttataaatatttatctattatattgttacgtttatttaagtttttgaaagaaatggt 1663
Query: 1987 tgtgtgtttatattattcgcttatatccctggatactgtacgtggagtagatatggtcac 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 tgtgtgtttatattattcgcttatatccctggatactgtacgtggagtagatatggtcac 1723
Query: 2047 gtgcctccagctgtcaaccgcaacagtgagatgcgagatcaaagtataatagttataaat 2106
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1724 gtgcctccagctgtcaaccgcaatagtgagatgcgagatcaaagtataatagttataaat 1783
Query: 2107 gcatgaaaacatagaagaaatattgttagtcgaataaattttatcacgtttgtagttatt 2166
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1784 gcatgaaaacatagaagaaatattgttagttgaataaattttatcacgtttgtagttatt 1843
Query: 2167 tatttgaaataaaattgtttgcgaggaattgattgaggatggctgtgcggttaaattatg 2226
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1844 tatttgaaataaaattgtttgcgaggaattgattgaggatggctgtgcggttaaattatt 1903
Query: 2227 aattataaattttaaacag 2245
|||||||||||||||||||
Sbjct: 1904 aattataaattttaaacag 1922
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,700
Number of extensions: 4400
Number of successful extensions: 4400
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4400
Number of HSP's successfully gapped: 1
Length of query: 2374
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2357
Effective length of database: 8,119,229
Effective search space: 19137022753
Effective search space used: 19137022753
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)