BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN21608 (UTR included)
         (3307 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01012B2H07                                                          809   0.0  

>BF01012B2H07
          Length = 601

 Score =   bits (408), Expect = 0.0
 Identities = 423/428 (98%)
 Strand = Plus / Plus

                                                                        
Query: 2880 gtcaatcgccattccgttacgtgtgtagttccagtacgtggtttgatgtgtcaaattgtc 2939
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gtcaatcgccattccgttacttgtgtagttccagtacgtggtttgatgtgtcaaattgtc 60

                                                                        
Query: 2940 tcttccgtctcctcccgtcattgaatagttaccaaatatttctttgatgttttttattat 2999
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tcttccgtctcttcccgtcattgaatagttaccaaatatttctttgatgttttttattat 120

                                                                        
Query: 3000 acaatatttcgaccaatatatttctatatagacgtgtaaaactctcgactgaagcgactt 3059
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  acaatatttcgaccaatatatttctatatagacgtgtaaaactctcgactgaagcgactt 180

                                                                        
Query: 3060 ctctgtccatcgtgatttatttctattaggacgtttatgaaaattatacacttatctata 3119
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181  ctctgtccatcgtgatttatttctattaggacgtttataaaaattatacacttatctata 240

                                                                        
Query: 3120 ttatacactcatatacttctgtgtgccggatgtctttggtgatccgcggatcgtgtagtc 3179
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 241  ttatacactcatatacttctgtgtgccggatgtctttggtgatccgcggatcgtctcgtc 300

                                                                        
Query: 3180 cgaccaggacccggaatgtactagcgaggtagaagtgaacggatcatttaattcatgttg 3239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  cgaccaggacccggaatgtactagcgaggtagaagtgaacggatcatttaattcatgttg 360

                                                                        
Query: 3240 gaaatatatgaccatcgtaacttgacacctcacaatattcctcttacattccggcacatt 3299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gaaatatatgaccatcgtaacttgacacctcacaatattcctcttacattccggcacatt 420

                    
Query: 3300 atttatat 3307
            ||||||||
Sbjct: 421  atttatat 428


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,956
Number of extensions: 7948
Number of successful extensions: 7948
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7948
Number of HSP's successfully gapped: 1
Length of query: 3307
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3289
Effective length of database: 8,109,745
Effective search space: 26672951305
Effective search space used: 26672951305
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)