BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21623 (UTR included)
(4105 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_8_C1 1683 0.0
>BF14_8_C1
Length = 1508
Score = 1683 bits (849), Expect = 0.0
Identities = 858/862 (99%)
Strand = Plus / Plus
Query: 3244 cgtacggcgggggggggtccgtcagccggcgaggcggcgagtacggcgacctggccgaca 3303
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7 cgtacggcgggggggggtccgtcagccggnnnggcggcgagtacggcgacctggccgaca 66
Query: 3304 ccgacatggtcgacgtggagaatgtgagcgatatggactatgtggaccgtgcttaccggc 3363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 ccgacatggtcgacgtggagaatgtgagcgatatggactatgtggaccgtgcttaccggc 126
Query: 3364 cgggtggtggggtgctggggccgggagaggtgaggtgggctcacggatacgccctgcccg 3423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cgggtggtggggtgctggggccgggagaggtgaggtgggctcacggatacgccctgcccg 186
Query: 3424 gggagcccggcccgagcgggctggcggcgggcgctgtagtccccgcggcggggcgactcg 3483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gggagcccggcccgagcgggctggcggcgggcgctgtagtccccgcggcggggcgactcg 246
Query: 3484 gcggccccgacgagaacggacacggagccctgcggacggtcagggccttcatagtactgg 3543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gcggccccgacgagaacggacacggagccctgcggacggtcagggccttcatagtactgg 306
Query: 3544 agcagcgaaggcgagccaggagcgacttctccatcgacgccatactggcggctgactact 3603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agcagcgaaggcgagccaggagcgacttctccatcgacgccatactggcggctgactact 366
Query: 3604 gaacaccatcatcgttacgttgttattaattcatagttatcataggacactggttctcat 3663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaacaccatcatcgttacgttgttattaattcatagttatcataggacactggttctcat 426
Query: 3664 tattgttttgtactatatagttacgagcacacattgattagtacgtaagatgtaacacgc 3723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tattgttttgtactatatagttacgagcacacattgattagtacgtaagatgtaacacgc 486
Query: 3724 atatatacgtgcaccacccggacgtgacccacgcgtgtccagtacacgaacaccggacct 3783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atatatacgtgcaccacccggacgtgacccacgcgtgtccagtacacgaacaccggacct 546
Query: 3784 tacactctatctatacaggacgtgacgcaacacgctcaccggatgtaactgacaatgaca 3843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tacactctatctatacaggacgtgacgcaacacgctcaccggatgtaactgacaatgaca 606
Query: 3844 tgtgtgacgcacacatacatatattgaaatgtatctacatgtgtgtgatccttgggctaa 3903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tgtgtgacgcacacatacatatattgaaatgtatctacatgtgtgtgatccttgggctaa 666
Query: 3904 atgtttgtaggaattaagtcgaaaacagaatctgacgttaaaactgtctgtatgtaagta 3963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atgtttgtaggaattaagtcgaaaacagaatctgacgttaaaactgtctgtatgtaagta 726
Query: 3964 atatgtctgtacaccgaatgttctaaacagttgtaacggccggcggtctagatgttgtag 4023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atatgtctgtacaccgaatgttctaaacagttgtaacggccggcggtctagatgttgtag 786
Query: 4024 ttgttgagttatacgagtatatagatggacatgtacgtagatgtagtatccgtgtctcat 4083
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ttgttgagttataccagtatatagatggacatgtacgtagatgtagtatccgtgtctcat 846
Query: 4084 aatattttaatagtcataatca 4105
||||||||||||||||||||||
Sbjct: 847 aatattttaatagtcataatca 868
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,079
Number of extensions: 6632
Number of successful extensions: 6632
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6632
Number of HSP's successfully gapped: 1
Length of query: 4105
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4087
Effective length of database: 8,109,745
Effective search space: 33144527815
Effective search space used: 33144527815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)