BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21629 (UTR included)
(4441 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1717_C1 648 0.0
BF01023B1C02 424 e-118
BF01016A2H08 303 1e-81
>BF14_1717_C1
Length = 1008
Score = 648 bits (327), Expect = 0.0
Identities = 416/439 (94%), Gaps = 5/439 (1%)
Strand = Plus / Plus
Query: 602 gccgagttggttacgaagtaaggagttttgggacaaatcctttgaagatcgctacgagaa 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gccgagttggttacgaagtaaggagttttgggacaaatcctttgaagatcgctacgagaa 467
Query: 662 aatgaagaacgactcccgccgtccgagactcaaggtgatcgtggtgccgcactcccacaa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aatgaagaacgactcccgccgtccgagactcaaggtgatcgtggtgccgcactcccacaa 527
Query: 722 cgaccccggctggctgaaaaccttcgagcagtacttcgagtggaagaccaagaacatcat 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cgaccccggctggctgaaaaccttcgagcagtacttcgagtggaagaccaagaacatcat 587
Query: 782 caacaacatggtcaccaagttgcaccagctccccaacatgactttcatctggagcgagat 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 caacaacatggtcaccaagttgcaccagctccccaacatgactttcatctggagcgagat 647
Query: 842 atcgttccttaacgagtggtgggaacggtcgcatcccgttaagcagaagatagcgctg-g 900
||||||||||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct: 648 atcgttccttaacgagtggtgggaacggtcgcatcccgttaagcagaaggta-cactgtc 706
Query: 901 tggctggcggctgg-tggctggcggctggcggctggcggctggtggctggtggctggcgg 959
|| || || || | |||| | | || ||||| |||||| ||||||||||||||||
Sbjct: 707 gggatgtcgataggacgtctggtagatagc-gctggtggctggcggctggtggctggcgg 765
Query: 960 ctggcaggctggcggctgtcggctggcgaccggtcgccggtggagggtttagtgacggta 1019
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ctggc-ggctggcggctgtcggctggcgaccggtcgccggtggagggtttagtgacggta 824
Query: 1020 gccgtggtagcgtgcactg 1038
|| ||||||||||||||||
Sbjct: 825 gctgtggtagcgtgcactg 843
>BF01023B1C02
Length = 809
Score = 424 bits (214), Expect = e-118
Identities = 223/226 (98%)
Strand = Plus / Plus
Query: 4216 atattttatagagttgtctttgctgtgccgtttattatatttattgtatgaacagtaacc 4275
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 atattttatagagttgtctttgctgtgccgtttattatatttattgtatgaactgtaacc 60
Query: 4276 gactcgacttatctcagtcgtgcgattcctcacgagatctcacttagtctgtacgtgctg 4335
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 gactcgacttatctcagtcgtgcgacgcctcacgagatctcacttagtctgtacgtgctg 120
Query: 4336 ttcactgcgtatcgtcataataatgttttgaatcactttacagtgtacagcgagccagtg 4395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcactgcgtatcgtcataataatgttttgaatcactttacagtgtacagcgagccagtg 180
Query: 4396 gccgctgtacagttagttattattatttatatgctaagggaggcgt 4441
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccgctgtacagttagttattattatttatatgctaagggaggcgt 226
>BF01016A2H08
Length = 633
Score = 303 bits (153), Expect = 1e-81
Identities = 171/178 (96%)
Strand = Plus / Plus
Query: 4264 tgaacagtaaccgactcgacttatctcagtcgtgcgattcctcacgagatctcacttagt 4323
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tgaactgtaaccgactcgacttatctcagtcgtgcgacgcctcacgagatctcacttatn 60
Query: 4324 ctgtacgtgctgttcactgcgtatcgtcataataatgttttgaatcactttacagtgtac 4383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 nngtacgtgctgttcactgcgtatcgtcataataatgttttgaatcactttacagtgtac 120
Query: 4384 agcgagccagtggccgctgtacagttagttattattatttatatgctaagggaggcgt 4441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcgagccagtggccgctgtacagttagttattattatttatatgctaagggaggcgt 178
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 359,503
Number of extensions: 6038
Number of successful extensions: 6038
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6030
Number of HSP's successfully gapped: 6
Length of query: 4441
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4423
Effective length of database: 8,109,745
Effective search space: 35869402135
Effective search space used: 35869402135
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)