BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21654 (UTR included)
(1972 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027B2D04 1552 0.0
>BF01027B2D04
Length = 816
Score = 1552 bits (783), Expect = 0.0
Identities = 809/817 (99%), Gaps = 1/817 (0%)
Strand = Plus / Plus
Query: 766 agcttcaggtggtgcaattacttcaagacttaattgacaataaacaaaggtcccttgatg 825
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 agcttcaggttgtgcaattacttcaagacttcnntgacaataaacaaaggtcccttgatg 60
Query: 826 ctgatcacaagaaactaatttcctgtctagaagttaacacaaatggtacaagtaaagaag 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgatcacaagaaactaatttcctgtctagaagttaacacaaatggtacaagtaaagaag 120
Query: 886 aacctaccccagcttcggagtctcgatcaaatgagaaagactcaaacacacaacaggtgc 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacctaccccagcttcggagtctcgatcaaatgagaaagactcaaacacacaacaggtgc 180
Query: 946 aacaacgacattcaacacctccagcaccaccagaacgaactagtgagaaagagaaagaaa 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacaacgacattcaacacctccagcaccaccagaacgaactagtgagaaagagaaagaaa 240
Query: 1006 agtcagacaaagataaatcaggaggcgaacgttggtcaaaacgtgcgagacgtgttcgaa 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtcagacaaagataaatcaggaggcgaacgttggtcaaaacgtgcgagacgtgttcgaa 300
Query: 1066 ctacagctggtgttgcgactgacggtgcagactcaagtgaacgtgatagtgaacgccaca 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctacagctggtgttgcgactgacggtgcagactcaagtgaacgtgatagtgaacgccaca 360
Query: 1126 cccacaacacaacacacaagaaaggtataggcaagaagaaaaagcgtaaatctcggcaag 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccacaacacaacacacaagaaaggtataggcaagaagaaaaagcgtaaatctcggcaag 420
Query: 1186 tggctcaacgatctgaaacaccaccagaagaaacagatgctatcgatcccgatgaaccaa 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggctcaacgatctgaaacaccaccagaagaaacagatgctatcgatcccgatgaaccaa 480
Query: 1246 gatattgtctgtgcgatcagatctcattcggtgagatgattttatgtgacaacgatctct 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatattgtctgtgcgatcagatctcattcggtgagatgattttatgtgacaacgatctct 540
Query: 1306 gtccgatagaatggttccatttttcatgtgtatcactcacaacaaaaccgaagggtaaat 1365
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtccgatagaatggttccacttttcatgtgtatcactcacaacaaaaccgaagggtaaat 600
Query: 1366 ggttttgtcccaaatgccgtggcgacagacccaatataatgaaacccaagggacaattcc 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggttttgtcccaaatgccgtggcgacagacccaatataatgaaacccaagggacaattcc 660
Query: 1426 ttaaggagttagagcggtataacagagaaaaagaggagaaagcatagtgattactagaca 1485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttaaggagttagagcggtataacagagaaaaagaggagaaagcatagtgattactagaca 720
Query: 1486 agtgagatgacaaagaattaagtgttctgttgatataatttaaaaaaatattctttagtg 1545
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 721 agtgagatgacaaagaattaagtgttctgttgatataaatttaaaaaatattctttagtg 780
Query: 1546 acaaaattcatattcgtatttagttttttatatctag 1582
|||||||||||||||||||||| ||||||||||||||
Sbjct: 781 acaaaattcatattcgtattta-ttttttatatctag 816
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,963
Number of extensions: 6665
Number of successful extensions: 6665
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6664
Number of HSP's successfully gapped: 1
Length of query: 1972
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1955
Effective length of database: 8,119,229
Effective search space: 15873092695
Effective search space used: 15873092695
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)