BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21660 (UTR included)
(1456 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1594_C1 1653 0.0
>BF14_1594_C1
Length = 891
Score = 1653 bits (834), Expect = 0.0
Identities = 875/891 (98%), Gaps = 8/891 (0%)
Strand = Plus / Plus
Query: 331 agtctgacaaccctttcattggtagtgacgaagtcttatttagcaaacaaagaactaagt 390
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 agtctgacaaccctttcattggtagtgacgaagtcttatttagcaaacaaagaactaatt 60
Query: 391 taacattaacttcccatgactatattttataataaaacaagcacatgagtatacccttta 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taacattaacttcccatgactatattttataataaaacaagcacatgagtatacccttta 120
Query: 451 gaaacaaattaatagtttactttgtgcagtgactaagtgagtgaaacaagatgtcaactc 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaacaaattaatagtttactttgtgcagtgactaagtgagtgaaacaagatgtcaactc 180
Query: 511 ctgccagaagacgtctgatgagagattttaaacgtctccaagaagatccacccactggtg 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgccagaagacgtctgatgagagattttaaacgtctccaagaagatccacccactggtg 240
Query: 571 tatcaggggcccccactgataataatataatgatctggaatgctgtgatattcggccctc 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatcaggggcccccactgataataatataatgatctggaatgctgtgatattcggccctc 300
Query: 631 acgatactccatttgaggatggcaccttcaagctaactatagagttcacagaggaatatc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgatactccatttgaggatggcaccttcaagctaactatagagttcacagaggaatatc 360
Query: 691 caaacaaaccacctatagtacgatttgtatctaagatgtttcatcccaatgtatatgcag 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaacaaaccacctatagtacgatttgtatctaagatgtttcatcccaatgtatatgcag 420
Query: 751 atggtggtatctgtttagacattttacaaaatagatggagtccaacatatgatgtgtcag 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggtggtatctgtttagacattttacaaaatagatggagtccaacatatgatgtgtcag 480
Query: 811 ctattttaacttctatacagtcattacttagcgaccccaatccgaactcaccagccaact 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctattttaacttctatacagtcattacttagcgaccccaatccgaactcaccagccaact 540
Query: 871 cgatggctgcacaactgtataaagaaaatcgaagggaatacgagaaacgggttaaagcat 930
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caatggctgcacaactgtataaagaaaatcgaagggaatacgagaaacgggttaaagcat 600
Query: 931 gcgtcgaacagtcatttattgattagcagttggcttttgtcgacccatgtccattggaca 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcgtcgaacagtcatttattgattagcagttggcttttgtcgacccatgtccattggaca 660
Query: 991 caccaaaaccggcttacacctccatagtcattgggatgtgtgtaaaattattattattaa 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caccaaaaccggcttacacctccatagtcattgggatgtgtgtaaaattattattattaa 720
Query: 1051 ttaactacaaagtgcatcatcaccaaccaaggcatcaggcagtaacattatatatttaat 1110
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 721 ttaactacaaagtgcatcatcaccaaccaaggcatcaggcagttacattatatatttaat 780
Query: 1111 tctaatgcaaataaacttgtcacttgtagcagaaaaatat--------aacaatatagaa 1162
||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 781 tctaatgcaaataaacttgtcacttgtagcannnnaatattaacagtaaacaatatagaa 840
Query: 1163 gtttgcattgcagtaacaatagctgtagttgaaacatacatttatttattt 1213
||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 841 gtttgcattgcagtaacaatagctgtagttgaaacatacatatatttattt 891
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,678
Number of extensions: 21597
Number of successful extensions: 21597
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21597
Number of HSP's successfully gapped: 2
Length of query: 1456
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1439
Effective length of database: 8,119,229
Effective search space: 11683570531
Effective search space used: 11683570531
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)