BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21700 (UTR included)
(4915 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B2C08 1592 0.0
>BF01034B2C08
Length = 855
Score = 1592 bits (803), Expect = 0.0
Identities = 843/855 (98%), Gaps = 1/855 (0%)
Strand = Plus / Plus
Query: 3856 gactggctgacgataaacgatcttgtctagatattgacgaatgtgaaaatggccaggctc 3915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gactggctgacgataaacgatcttgtctagatattgacgaatgtgaaaatggccaggctc 60
Query: 3916 gctgcggtggagtgggagaggtttgtcagaacacccgcggtggctaccactgccatcaga 3975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgcggtggagtgggagaggtttgtcagaacacccgcggtggctaccactgccatcaga 120
Query: 3976 taaaatgcccgccagggtaccgcctcgaaggaaaacacaaatgcgctcggatacaacgct 4035
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 taaaatgcccgccagggtaccgcctcgaaggaaaacacaaatgtgctcggatacaacgct 180
Query: 4036 cgtgtccagtctcggactggtcgtgtcttcagcaaccgagtacctacagctacaatttta 4095
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 cgtgtccagtctcggactggtcgtgtcttcagcaaccgagtacctacatctacaatttta 240
Query: 4096 taacattcgtctccaacttgtatttgcctctaggaagtgtggatctattctctatgcaag 4155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taacattcgtctccaacttgtatttgcctctaggaagtgtggatctattctctatgcaag 300
Query: 4156 gtcctgcatggcgtgatgctgtagtgaactttgagatgcgtctcttagacgtgcaagcgg 4215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcctgcatggcgtgatgctgtagtgaactttgagatgcgtctcttagacgtgcaagcgg 360
Query: 4216 cgcctggagtcaaaccggcagatatcacgtgctttggcatgaggcctagtagcaacgtct 4275
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgcctggagtcaaaccggcggatatcacgtgctttggcatgaggcctagtagcaacgtct 420
Query: 4276 gtgtgatctctctccaatgttcccttcaaggtccacaagtagctgaattggaactaacca 4335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgtgatctctctccaatgttcccttcaaggtccacaagtagctgaattggaactaacca 480
Query: 4336 tgtctctataccaaagatctatgttcgctggcaacgctgtcgccagactagtcgtgatcg 4395
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtccctataccaaagatctatgttcgctggcaacgctgtcgccagactagtcgtgatcg 540
Query: 4396 tatcagaatacgagtactaaggaatgttattacctaaatatgaaatccaaattttataaa 4455
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 541 tatcagaatacgagtactaaggaatgttattacctaaatatgaaatccatattttataaa 600
Query: 4456 ttgtaaatacttgattaaaatttaatttcatcgcctataaatgtatataaaatagcagct 4515
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 601 ttgtaaatacttgattaaaatttaatttcatcgcctataaatgtatataaaatagtagct 660
Query: 4516 tgtttga-ataaaaaaaaatttttttttactaaatttaatacaccaaccataactttgat 4574
||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 661 tgtttgataaaaaaaaaaatttttttttactaatattaatacaccaaccataactttgat 720
Query: 4575 atgagaaattctatcgtgaatttaatttttttaatatcataatattatgttactattaat 4634
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 721 atgagaaattctatcgtgaattaattttttttaatatcataatattatgttactattaat 780
Query: 4635 aattttatatatgtaaaattcaatgaaaatataatattcggaattctgagggtagtttta 4694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aattttatatatgtaaaattcaatgaaaatataatattcggaattctgagggtagtttta 840
Query: 4695 aataaaagtcatgta 4709
|||||||||||||||
Sbjct: 841 aataaaagtcatgta 855
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 569,352
Number of extensions: 25861
Number of successful extensions: 25861
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 25859
Number of HSP's successfully gapped: 1
Length of query: 4915
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4897
Effective length of database: 8,109,745
Effective search space: 39713421265
Effective search space used: 39713421265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)