BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21706 (UTR included)
(1106 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A1F07 591 e-169
BF14_281_C2 363 e-100
BF14_281_C1 349 6e-96
BF14_547_C1 111 2e-24
>BF01005A1F07
Length = 694
Score = 591 bits (298), Expect = e-169
Identities = 352/370 (95%)
Strand = Plus / Plus
Query: 187 cagggcgatgagctgaaggtccgagtggtagattaccagactgtacatgctggatgtgct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagggcgatgagctgaaggtccgagtggtagattaccagactgtacatgctggatgtgct 384
Query: 247 gtgacagatctcgtgtacttcatatatcttggttcagatgaagagtttctccgtttatat 306
||||||||||||||||||||||||||||| | || |||||||||||||||||| | |||
Sbjct: 385 gtgacagatctcgtgtacttcatatatctaagctcggatgaagagtttctccgtctttat 444
Query: 307 tttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaagaggttgtct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaagaggttgtct 504
Query: 367 gtggatcccgtagaagtatatccaagggagcaatttgaaagagatttgaaagagaagtta 426
|| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 505 gtcgatcccgtagaagtgtatccaagagagcaatttgaaagagatttgaaagagaagtta 564
Query: 427 ccatacgcggttctggtaggtgtgctactcttgccagttattgttgcggatgaaaactca 486
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||| | |||
Sbjct: 565 ccatacgcggttctggcaggtgtgctactcttgccagttattattgcggatgaagaatca 624
Query: 487 ggtccaaaaattaacaatgatgaagctgatgtttccaccttcattgtgaagactaacgat 546
| ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 625 gctccaaaacttaacaatgatttagctgatatttccaccttcattgtgaagactaacgat 684
Query: 547 ttatttgctg 556
||||||||||
Sbjct: 685 ttatttgctg 694
>BF14_281_C2
Length = 931
Score = 363 bits (183), Expect = e-100
Identities = 210/219 (95%)
Strand = Plus / Plus
Query: 187 cagggcgatgagctgaaggtccgagtggtagattaccagactgtacatgctggatgtgct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 cagggcgatgagctgaaggtccgagtggtagattaccagactgtacatgctggatgtgct 772
Query: 247 gtgacagatctcgtgtacttcatatatcttggttcagatgaagagtttctccgtttatat 306
||||||||||||||||||||||||||||| | || |||||||||||||||||| | |||
Sbjct: 773 gtgacagatctcgtgtacttcatatatctaagctcggatgaagagtttctccgtctttat 832
Query: 307 tttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaagaggttgtct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 tttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaagaggttgtct 892
Query: 367 gtggatcccgtagaagtatatccaagggagcaatttgaa 405
|| |||||||||||||| |||||||| ||||||||||||
Sbjct: 893 gtcgatcccgtagaagtgtatccaagagagcaatttgaa 931
>BF14_281_C1
Length = 1235
Score = 349 bits (176), Expect = 6e-96
Identities = 188/192 (97%)
Strand = Plus / Plus
Query: 187 cagggcgatgagctgaaggtccgagtggtagattaccagactgtacatgctggatgtgct 246
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1044 cagggcgatgagctgaaggtccgagtggttgattaccagactgtacatgctggatgtgct 1103
Query: 247 gtgacagatctcgtgtacttcatatatcttggttcagatgaagagtttctccgtttatat 306
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 1104 gtgacagatctcgtgtacttcatatatcttggttcagatgaagagtttctccgtctttat 1163
Query: 307 tttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaagaggttgtct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 tttgacaaactagcaaatcattactatacaagtctcgaagcagcactcaagaggttgtct 1223
Query: 367 gtggatcccgta 378
|| |||||||||
Sbjct: 1224 gtcgatcccgta 1235
>BF14_547_C1
Length = 1513
Score = 111 bits (56), Expect = 2e-24
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 277 ggttcagatgaagagtttctccgtttatattttgacaaactagcaaatcattactataca 336
|||||||||||| | || | |||| | |||| ||||||||||| ||||||||||||||||
Sbjct: 844 ggttcagatgaacacttccgccgtctctattatgacaaactagtaaatcattactataca 903
Query: 337 agtctcgaagcagcactcaagaggttgtctgtggatcccgtagaagtatatccaagggag 396
||||| |||| ||| ||| ||||| || |||||||||| |||||||| ||||| || |||
Sbjct: 904 agtctagaagaagcgctccagaggctggctgtggatccagtagaagtgtatccgagagag 963
Query: 397 caatttgaaagagatttgaaagag 420
|||||||| ||||||||||||
Sbjct: 964 agctttgaaagtgatttgaaagag 987
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 195,718
Number of extensions: 16536
Number of successful extensions: 16536
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 16534
Number of HSP's successfully gapped: 4
Length of query: 1106
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1089
Effective length of database: 8,119,229
Effective search space: 8841840381
Effective search space used: 8841840381
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)