BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21709 (UTR included)
(3475 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1781_C1 1556 0.0
BF14_729_C3 82 7e-15
BF14_729_C2 80 3e-14
BF01012A2C11 74 2e-12
BF01019B1G10 72 7e-12
BF01042A2B06 70 3e-11
>BF14_1781_C1
Length = 1079
Score = 1556 bits (785), Expect = 0.0
Identities = 809/817 (99%)
Strand = Plus / Plus
Query: 2443 gtggtgtgctgggcgtgctggaagcgctccgtggccggcaacagctccgcggcctgggcg 2502
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtgcgctgggcgtgctggaagcgctccgtggccggcaacagctccgcggcctgggcg 60
Query: 2503 gggagctcatgaggcaggcggcgtgcaacgcgctcggcagactagccactgccgccgcgc 2562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggagctcatgaggcaggcggcgtgcaacgcgctcggcagactagccactgccgccgcgc 120
Query: 2563 ccatacactcagccgacacgctcgatgagtggctgaatctgatcgaggagtgtctgtccc 2622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatacactcagccgacacgctcgatgagtggctgaatctgatcgaggagtgtctgtccc 180
Query: 2623 atgaagtacagacgattagagaaaaggccatcgacgctttgccgaaaatattcgaagaat 2682
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 atgaagtacagacgattagagaaaaggccatcgacgctctgccgaaaatattcgaagaat 240
Query: 2683 atctcaaggacgataaagtccaatattctgaaatcaacgccaaggagaagagaatgcaac 2742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atctcaaggacgataaagtccaatattctgaaatcaacgccaaggagaagagaatgcaac 300
Query: 2743 tggtgcaaaagtactgcgaacatttgaacagctccggggtcaatggcctctttctcagga 2802
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 301 tggtgcaaaagtactgcgaacatttgaacagctccggggtcaatggcctcttcctcagga 360
Query: 2803 tgggatattctcgagctcttggttcgctgccgaagttcgttttgttggagagcatgcaat 2862
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 tgggatattctcgagctcttggttcgcttccgaagttcgttttgttggagagcatgcaat 420
Query: 2863 tagtcatcgagtcactgatacagtgtactaaagtgacagaggcaaccatgaagtgggcgg 2922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tagtcatcgagtcactgatacagtgtactaaagtgacagaggcaaccatgaagtgggcgg 480
Query: 2923 aggctcgccgggacgcggtgctagggttgacggacgtgtgtcaaactgtagggctccaag 2982
|||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||
Sbjct: 481 aggctcgccgggacgcagtgctagggttgactgatgtgtgtcaaactgtagggctccaag 540
Query: 2983 gagagatggagcggtatgtggaggacgttaggacagccctactggactgtctggcggagt 3042
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 541 gagagatggagcggtatgtggaggacgttaggaaagccctactggactgtctggcggagt 600
Query: 3043 acactgtggacatgagaggagatataggagcctgggtcagggaagccagtatgaccggtc 3102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acactgtggacatgagaggagatataggagcctgggtcagggaagccagtatgaccggtc 660
Query: 3103 ttgtgtcgctgtgtagtcagtgttcgtcccaggcgcctcacttgaacacgccctcggcgg 3162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgtgtcgctgtgtagtcagtgttcgtcccaggcgcctcacttgaacacgccctcggcgg 720
Query: 3163 tcggagacacggctcgcggtctggctcagcaggccgtggagaaaatagacaggacgagag 3222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcggagacacggctcgcggtctggctcagcaggccgtggagaaaatagacaggacgagag 780
Query: 3223 cacacgccgggaggctcttcaccgcactcatctacaa 3259
|||||||||||||||||||||||||||||||||||||
Sbjct: 781 cacacgccgggaggctcttcaccgcactcatctacaa 817
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 7e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 3427 tttaaaaactacatactcccgacgtttgggttactttgcagcaaccgtg 3475
||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1653 tttaaaaactacataatcccgacgtttcggttactttgcagcaaccgtg 1605
>BF14_729_C2
Length = 1289
Score = 79.8 bits (40), Expect = 3e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 3428 ttaaaaactacatactcccgacgtttgggttactttgcagcaaccgtg 3475
|||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 592 ttaaaaactacatactcccgacgtttcggttacttttcagcaaccgtg 545
>BF01012A2C11
Length = 780
Score = 73.8 bits (37), Expect = 2e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 3427 tttaaaaactacatactcccgacgtttgggttactttgcagcaaccgtg 3475
||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 239 tttaaaaactaaatgctcccgacgtttcggttactttgcagcaaccgtg 287
>BF01019B1G10
Length = 488
Score = 71.9 bits (36), Expect = 7e-12
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 3392 atatttttcgggtttacttacacgtattttactattttaaaaactacatactcccgacgt 3451
|||||||||| |||||| || || |||||| |||||||||||||||||| |||||||||
Sbjct: 304 atatttttcgcatttact-acgcgaattttattattttaaaaactacataatcccgacgt 362
Query: 3452 ttgggttactttgcagcaaccgtg 3475
|| |||| |||| ||| |||||||
Sbjct: 363 ttcggttccttttcagtaaccgtg 386
>BF01042A2B06
Length = 781
Score = 69.9 bits (35), Expect = 3e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 3424 tattttaaaaactacatactcccgacgtttgggttactttgcagcaaccgt 3474
|||||| |||||||||||||| |||||||| |||||||| |||||||||||
Sbjct: 294 tatttttaaaactacatactcacgacgtttcggttacttcgcagcaaccgt 244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 364,839
Number of extensions: 7521
Number of successful extensions: 7521
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 7521
Number of HSP's successfully gapped: 6
Length of query: 3475
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3457
Effective length of database: 8,109,745
Effective search space: 28035388465
Effective search space used: 28035388465
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)