BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21720 (UTR included)
(1207 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1B09 94 6e-19
BF14_729_C3 92 2e-18
BF01056A1B08 86 2e-16
BF01025B2E05 86 2e-16
BF01012A1E04 84 6e-16
BF01019B1G10 76 1e-13
BF01024A1H07 76 1e-13
BF01052B1F12 70 9e-12
BF14_729_C2 70 9e-12
>BF01012A1B09
Length = 841
Score = 93.7 bits (47), Expect = 6e-19
Identities = 81/91 (89%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 998 gaaactaatatatttcaaatatactacgcgaattttattattt-aaaactacataatctt 1056
|||||||||||||||| ||| |||||||| |||||||||||| ||||||||||||||
Sbjct: 744 gaaactaatatatttcggatacactacgcggattttattattttaaaactacataatccc 803
Query: 1057 gccgtttcagttacttttcagcaaccgtgat 1087
| |||||| |||||||||||||| |||||||
Sbjct: 804 gacgtttcggttacttttcagcagccgtgat 834
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 1113 ttagtttcatttaaatgaataaaactcgcgaaagtcttaaatctcat 1159
||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 751 ttagtttcatttaaatgaataaaactcgcgacagtcttagatctcat 705
>BF14_729_C3
Length = 2041
Score = 91.7 bits (46), Expect = 2e-18
Identities = 83/94 (88%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 1016 atatactacgcgaattttattatttaaaa-ctacataatcttgccgtttcagttactttt 1074
|||||||||||| |||||||||||||||| |||||||||| | |||||| ||||||||
Sbjct: 1675 atatactacgcggattttattatttaaaaactacataatcccgacgtttcggttactttg 1616
Query: 1075 cagcaaccgtgataacgagcagacgggatgtgaa 1108
||||||||||||| ||| ||||||| | ||||||
Sbjct: 1615 cagcaaccgtgatcacgggcagacgaggtgtgaa 1582
>BF01056A1B08
Length = 761
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 1113 ttagtttcatttaaatgaataaaactcgcgaaagtcttaaatctcat 1159
||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 142 ttagtttcatttaaatgaataaaactcgcgaaagtcttagatctcat 96
>BF01025B2E05
Length = 759
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 1114 tagtttcatttaaatgaataaaactcgcgaaagtcttaaatctcatt 1160
|||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 74 tagtttcatttaaatgaataaaactcgcgaaagtcttagatctcatt 120
>BF01012A1E04
Length = 841
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 1113 ttagtttcatttaaatgaataaaactcgcgaaagtcttaaatctca 1158
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 573 ttagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 618
>BF01019B1G10
Length = 488
Score = 75.8 bits (38), Expect = 1e-13
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1019 tactacgcgaattttattattt--aaaactacataatcttgccgtttcagttacttttca 1076
|||||||||||||||||||||| |||||||||||||| | |||||| ||| |||||||
Sbjct: 318 tactacgcgaattttattattttaaaaactacataatcccgacgtttcggttccttttca 377
Query: 1077 gcaaccgtgataacgagcaga 1097
| ||||||||| ||| |||||
Sbjct: 378 gtaaccgtgatcacgggcaga 398
>BF01024A1H07
Length = 726
Score = 75.8 bits (38), Expect = 1e-13
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 1024 cgcgaattttattattt-aaaactacataatcttgccgtttcagttacttttcagcaacc 1082
|||| |||||||||||| ||| ||||||||| | |||||| |||||||||||||||||
Sbjct: 726 cgcggattttattattttaaanctacataatncngacgtttcggttacttttcagcaacc 667
Query: 1083 gtgataacgagcagacgggatgt 1105
||||| ||| ||||||| |||||
Sbjct: 666 gtgatcacgggcagacgagatgt 644
>BF01052B1F12
Length = 785
Score = 69.9 bits (35), Expect = 9e-12
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 1113 ttagtttcatttaaatgaataaaactcgcgaaagtctta 1151
||||||||||||||||||||||||||||||||| |||||
Sbjct: 343 ttagtttcatttaaatgaataaaactcgcgaaattctta 305
>BF14_729_C2
Length = 1289
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 1114 tagtttcatttaaatgaataaaactcgcgaaagtcttaaatctcatt 1160
||||||||||||||||| ||||||| |||||||||||| ||||||||
Sbjct: 629 tagtttcatttaaatgattaaaactggcgaaagtcttagatctcatt 675
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,188
Number of extensions: 6465
Number of successful extensions: 6465
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 6461
Number of HSP's successfully gapped: 10
Length of query: 1207
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1190
Effective length of database: 8,119,229
Effective search space: 9661882510
Effective search space used: 9661882510
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)