BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21738 (UTR included)
(4753 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017B2B04 1405 0.0
>BF01017B2B04
Length = 722
Score = 1405 bits (709), Expect = 0.0
Identities = 716/717 (99%), Gaps = 1/717 (0%)
Strand = Plus / Plus
Query: 3295 acgttttcgccactgctgctcttcgatttggacactctatcattaatccacttttacatc 3354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 acgttttcgccactgctgctcttcgatttggacactctatcattaatccacttttacatc 66
Query: 3355 gttatgacgagaactttgagccgatccctcaaggtcatttactgttgcgtcatgcatttt 3414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gttatgacgagaactttgagccgatccctcaaggtcatttactgttgcgtcatgcatttt 126
Query: 3415 tctccccatggagactagtcgatgagggtggagttgatccgctatttagaggaatgttca 3474
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tctccc-atggagactagtcgatgagggtggagttgatccgctatttagaggaatgttca 185
Query: 3475 cgacgcctgctaaattgaagacaccaacacagaatttaaactctgaacttacggaaaaac 3534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cgacgcctgctaaattgaagacaccaacacagaatttaaactctgaacttacggaaaaac 245
Query: 3535 tattccatactgcacatgcagtcgctcttgacttagctgcaataaatattcaacgaggac 3594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tattccatactgcacatgcagtcgctcttgacttagctgcaataaatattcaacgaggac 305
Query: 3595 gtgatcatgctattccaccgtacaataaatggcggcaattttgcaatatgaccgaggcta 3654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gtgatcatgctattccaccgtacaataaatggcggcaattttgcaatatgaccgaggcta 365
Query: 3655 acgatttcgatgacttggccaatgagatcactgacaaaaccgtacgagacaagctaagag 3714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acgatttcgatgacttggccaatgagatcactgacaaaaccgtacgagacaagctaagag 425
Query: 3715 aattgtatggctctgtgcacaatattgatgtttgggttggtggcattttagaggatcaag 3774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aattgtatggctctgtgcacaatattgatgtttgggttggtggcattttagaggatcaag 485
Query: 3775 ttgagggaggtaaaataggacctcttttccgatgcttacttattgaacagtttcaacgat 3834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttgagggaggtaaaataggacctcttttccgatgcttacttattgaacagtttcaacgat 545
Query: 3835 tacgtcatggcgatcgtttgtggtatgaaaatccgtcgacattctcaagagaccaattgc 3894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tacgtcatggcgatcgtttgtggtatgaaaatccgtcgacattctcaagagaccaattgc 605
Query: 3895 gacaaatcaaaaacgcaaactttgcaagggttttatgtgataatggtgacaatattgata 3954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gacaaatcaaaaacgcaaactttgcaagggttttatgtgataatggtgacaatattgata 665
Query: 3955 caataagtgagaatgtattcttgttacctgaattacaggacggtcttgtatcttgcg 4011
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 caataagtgagaatgtattcttgttacctgaattacaggacggtcttgtatcttgcg 722
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 645,439
Number of extensions: 29942
Number of successful extensions: 29942
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 29941
Number of HSP's successfully gapped: 1
Length of query: 4753
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4735
Effective length of database: 8,109,745
Effective search space: 38399642575
Effective search space used: 38399642575
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)