BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21744 (UTR included)
(1429 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B2A05 589 e-168
>BF01059B2A05
Length = 536
Score = 589 bits (297), Expect = e-168
Identities = 324/332 (97%), Gaps = 1/332 (0%)
Strand = Plus / Plus
Query: 1099 attttttcatttatttttt-ttaagcgcacatgaaagtataactcatcattacaaacaaa 1157
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 15 attttttcatttattttttcttangcgcacatgaaagtataactcatcattacaaacaaa 74
Query: 1158 aaccaaactcgaaaagggtcttgaagttagtatagtcatatagacaaaccatttcactat 1217
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 75 aaccaaactcgaaaagggtcttgatgttagtatagtcatatagacaaaccatttcactat 134
Query: 1218 acagaaggctctaccgacagttggacctttgttggcatcgccctttgtatggcctagatg 1277
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 135 acagaaggctctaccgacagttggacctttgttggcatccccctttgtatggcctaaatg 194
Query: 1278 aaaatttatcaattcttgattttaaatccttgttctgagtttgatttttgcattgacaat 1337
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaaatttatcaattgttgattttaaatccttgttctgagtttgatttttgcattgacaat 254
Query: 1338 ccttaccaaacctatggatacactatgaaagtacagaattaaatgtacctgtaagctgtt 1397
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 255 ccttaccaaacctatggatacactatgaaagtacagaattgaatgtatctgtaagctgtt 314
Query: 1398 tacaatattctaataacgttgtagattaatct 1429
||||||||||||||||||||||||||||||||
Sbjct: 315 tacaatattctaataacgttgtagattaatct 346
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,198
Number of extensions: 4256
Number of successful extensions: 4256
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4255
Number of HSP's successfully gapped: 1
Length of query: 1429
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1412
Effective length of database: 8,119,229
Effective search space: 11464351348
Effective search space used: 11464351348
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)