BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21745 (UTR included)
(2671 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1E12 1564 0.0
BF01033B1C05 1227 0.0
>BF01044B1E12
Length = 810
Score = 1564 bits (789), Expect = 0.0
Identities = 804/810 (99%)
Strand = Plus / Plus
Query: 296 aaattatagttttcgtaattttttatggaatttgtgatgtttaagattcattttatgacc 355
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 aaattatagttttcgtaattttttatggannntgtgatgtttaagattcattttatgacc 60
Query: 356 ttgttaaacttttatacaagttgaaaaaatctggagcgatggagtcgcctccttctttct 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgttaaacttttatacaagttgaaaaaatctggagcgatggagtcgcctccttctttct 120
Query: 416 ccacgcactccgaagtgcctccgttaagcgaagacagtggtctgtttattacaagtggct 475
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 ccacgcactccgaagtgcctccgttgagcgaagacagtggtctgtttattacaagtggct 180
Query: 476 cattttctagtgattccgcgagtggatggcatcatattgcatccgagtaatagtagctga 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cattttctagtgattccgcgagtggatggcatcatattgcatccgagtaatagtagctga 240
Query: 536 gtcttttagacatcaaaatattaagttgcaagagagcgacttcgacgagcggtcgctatc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcttttagacatcaaaatattaagttgcaagagagcgacttcgacgagcggtcgctatc 300
Query: 596 aatgtgcgagacggaggcatcggaacgcatgtgcggtgactttttcaacaccgtgaaaaa 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatgtgcgagacggaggcatcggaacgcatgtgcggtgactttttcaacaccgtgaaaaa 360
Query: 656 gggtcctgggaaagttatcgtcactgcaatagaaccaccacctgaatttcaggatgatcc 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggtcctgggaaagttatcgtcactgcaatagaaccaccacctgaatttcaggatgatcc 420
Query: 716 aatacaaattagtgaagattgtgggtccacctcgggcgggtcaccaagtaattgtatggc 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatacaaattagtgaagattgtgggtccacctcgggcgggtcaccaagtaattgtatggc 480
Query: 776 tgtgcgagtgcctccatccgtcgtttttaggaacgatgttagtaaaacaaaatcatcgag 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtgcgagtgcctccatccgtcgtttttaggaacgatgttagtaaaacaaaatcatcgag 540
Query: 836 cttagaaattgcaatgacttctaggaatgtatcaccattgtatccgagaaaattgaaacc 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttagaaattgcaatgacttctaggaatgtatcaccattgtatccgagaaaattgaaacc 600
Query: 896 cgagtcattatatgagcggcgtcaatgtcttaaccataggtttgcgagtccgagactcct 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgagtcattatatgagcggcgtcaatgtcttaaccataggtttgcgagtccgagactcct 660
Query: 956 acatctcagcccgtgtcgtttgaacaggccgtcttctagaaactctctatcctctcgact 1015
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 acatctcagcccgtgtcgtttgaacaggccgtcttctagaaactctctgtcctctcgact 720
Query: 1016 ctccagcagtcacaactctttaattactcagttccaagcggacgactccagctttataac 1075
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctctagcagtcacaactctttaattactcagttccaagcggacgactccagctttataac 780
Query: 1076 tcaagctatatcacatgatactctctctgc 1105
||||||||||||||||||||||||||||||
Sbjct: 781 tcaagctatatcacatgatactctctctgc 810
>BF01033B1C05
Length = 849
Score = 1227 bits (619), Expect = 0.0
Identities = 619/619 (100%)
Strand = Plus / Plus
Query: 559 agttgcaagagagcgacttcgacgagcggtcgctatcaatgtgcgagacggaggcatcgg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 agttgcaagagagcgacttcgacgagcggtcgctatcaatgtgcgagacggaggcatcgg 290
Query: 619 aacgcatgtgcggtgactttttcaacaccgtgaaaaagggtcctgggaaagttatcgtca 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aacgcatgtgcggtgactttttcaacaccgtgaaaaagggtcctgggaaagttatcgtca 350
Query: 679 ctgcaatagaaccaccacctgaatttcaggatgatccaatacaaattagtgaagattgtg 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctgcaatagaaccaccacctgaatttcaggatgatccaatacaaattagtgaagattgtg 410
Query: 739 ggtccacctcgggcgggtcaccaagtaattgtatggctgtgcgagtgcctccatccgtcg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ggtccacctcgggcgggtcaccaagtaattgtatggctgtgcgagtgcctccatccgtcg 470
Query: 799 tttttaggaacgatgttagtaaaacaaaatcatcgagcttagaaattgcaatgacttcta 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tttttaggaacgatgttagtaaaacaaaatcatcgagcttagaaattgcaatgacttcta 530
Query: 859 ggaatgtatcaccattgtatccgagaaaattgaaacccgagtcattatatgagcggcgtc 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggaatgtatcaccattgtatccgagaaaattgaaacccgagtcattatatgagcggcgtc 590
Query: 919 aatgtcttaaccataggtttgcgagtccgagactcctacatctcagcccgtgtcgtttga 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aatgtcttaaccataggtttgcgagtccgagactcctacatctcagcccgtgtcgtttga 650
Query: 979 acaggccgtcttctagaaactctctatcctctcgactctccagcagtcacaactctttaa 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acaggccgtcttctagaaactctctatcctctcgactctccagcagtcacaactctttaa 710
Query: 1039 ttactcagttccaagcggacgactccagctttataactcaagctatatcacatgatactc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttactcagttccaagcggacgactccagctttataactcaagctatatcacatgatactc 770
Query: 1099 tctctgctaagacctcagacataactgacatgtacaatgtaccattcgacagcgacatat 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tctctgctaagacctcagacataactgacatgtacaatgtaccattcgacagcgacatat 830
Query: 1159 acgctgtgcccattgacat 1177
|||||||||||||||||||
Sbjct: 831 acgctgtgcccattgacat 849
Score = 454 bits (229), Expect = e-127
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 291 agttgaaattatagttttcgtaattttttatggaatttgtgatgtttaagattcatttta 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttgaaattatagttttcgtaattttttatggaatttgtgatgtttaagattcatttta 60
Query: 351 tgaccttgttaaacttttatacaagttgaaaaaatctggagcgatggagtcgcctccttc 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaccttgttaaacttttatacaagttgaaaaaatctggagcgatggagtcgcctccttc 120
Query: 411 tttctccacgcactccgaagtgcctccgttaagcgaagacagtggtctgtttattacaag 470
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 tttctccacgcactccgaagtgcctccgttgagcgaagacagtggtctgtttattacaag 180
Query: 471 tggctcattttctagtgattccgcgagtggatggcatcatattgcatccgagt 523
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggctcattttctagtgattccgcgagtggatggcatcatattgcatccgagt 233
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 333,332
Number of extensions: 7198
Number of successful extensions: 7198
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7198
Number of HSP's successfully gapped: 3
Length of query: 2671
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2654
Effective length of database: 8,119,229
Effective search space: 21548433766
Effective search space used: 21548433766
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)