BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21765 (UTR included)
(6934 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 129 6e-29
BF14_335_C4 117 2e-25
BF14_335_C2 92 1e-17
BF01048A1E04 88 2e-16
BF01056B2D01 86 9e-16
BF01017A1F03 82 1e-14
BF01044B1A07 76 8e-13
BF01014B2F02 74 3e-12
BF01049B1F01 70 5e-11
>BF01019A1H08
Length = 504
Score = 129 bits (65), Expect = 6e-29
Identities = 113/127 (88%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 6333 ttagctaggggccccttgaacctacacctgggtcgcaagtcccaggaactattgaagc-c 6391
|||| |||| ||||||| |||||||||||||||||||| ||||||| ||| ||||||| |
Sbjct: 492 ttagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctc 433
Query: 6392 ctctccccccaaaaacgcgatggacccggcacccgcacggtgaatccatggaatgctgag 6451
||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 432 ctctccctgc---aacgcgatggacccggcacccgcacggtgaatccattgaatgctaag 376
Query: 6452 aggtttc 6458
|||||||
Sbjct: 375 aggtttc 369
>BF14_335_C4
Length = 1491
Score = 117 bits (59), Expect = 2e-25
Identities = 106/120 (88%), Gaps = 5/120 (4%)
Strand = Plus / Plus
Query: 6342 ggccccttgaacctacacctgggtcgcaagtcccaggaactattgaagc-cctctccccc 6400
|||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||||| |
Sbjct: 1246 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcctgc 1305
Query: 6401 caaaaacgcgatggacccggcacccgcacggtgaatccatggaatgctgagaggtttcgt 6460
|||||||||| ||| ||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 1306 ----aacgcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgt 1361
>BF14_335_C2
Length = 1827
Score = 91.7 bits (46), Expect = 1e-17
Identities = 100/116 (86%), Gaps = 4/116 (3%)
Strand = Plus / Minus
Query: 6351 aacctacacctgggtcgcaagtcccaggaactattgaagc-cctctccccccaaaaacgc 6409
|||||||||||| ||||||| ||||||| ||| ||||||| |||||||| ||| |||
Sbjct: 918 aacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaa---cgc 862
Query: 6410 gatggacccggcacccgcacggtgaatccatggaatgctgagaggtttcgtatctt 6465
| |||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||
Sbjct: 861 ggcggacccggcacccgcacggtgaatccatagaaagctaagaggtttcgtctctt 806
>BF01048A1E04
Length = 789
Score = 87.7 bits (44), Expect = 2e-16
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 6405 aacgcgatggacccggcacccgcacggtgaatccatggaatgctgagaggtttcgt 6460
|||||||||||||||||||||||||||||||||||||||| | | |||||||||||
Sbjct: 1 aacgcgatggacccggcacccgcacggtgaatccatggaaagataagaggtttcgt 56
>BF01056B2D01
Length = 728
Score = 85.7 bits (43), Expect = 9e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 6410 gatggacccggcacccgcacggtgaatccatggaatgctgagaggtttcgt 6460
||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 129 gatggacccggcacccgcacggtgaattcatggaatgttgagaggtttcgt 79
>BF01017A1F03
Length = 782
Score = 81.8 bits (41), Expect = 1e-14
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 6408 gcgatggacccggcacccgcacggtgaatccatggaatgctgagaggtttcgt 6460
|||| ||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 291 gcgacggacccggcacccgcacggtgtatccatggaatgctgagaggattcgt 343
>BF01044B1A07
Length = 806
Score = 75.8 bits (38), Expect = 8e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 6406 acgcgatggacccggcacccgcacggtgaatccatggaatgctgagaggtttcg 6459
|||||||||||||| |||||||||||||||||||| ||| ||||||| ||||||
Sbjct: 484 acgcgatggacccgccacccgcacggtgaatccattgaacgctgagaagtttcg 431
>BF01014B2F02
Length = 623
Score = 73.8 bits (37), Expect = 3e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 6412 tggacccggcacccgcacggtgaatccatggaatgctgagaggtttcgt 6460
|||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 570 tggacccggcacccgcacggtgcatccactgaatgctgagaggtttcgt 522
>BF01049B1F01
Length = 840
Score = 69.9 bits (35), Expect = 5e-11
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 6341 gggccccttgaacctacacctgggtcgcaagtcccaggaactattgaagc-cctctccc 6398
||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 652 gggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccc 594
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 113,337
Number of extensions: 13618
Number of successful extensions: 13618
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 13618
Number of HSP's successfully gapped: 10
Length of query: 6934
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6916
Effective length of database: 8,109,745
Effective search space: 56086996420
Effective search space used: 56086996420
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)