BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21773 (UTR included)
(4480 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1E02 1509 0.0
>BF01025B1E02
Length = 765
Score = 1509 bits (761), Expect = 0.0
Identities = 764/765 (99%)
Strand = Plus / Plus
Query: 2836 tgaagatagctttcaaaagtttctgcgagcgcgtcgagaacatgaccaaacaggaagtcg 2895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagatagctttcaaaagtttctgcgagcgcgtcgagaacatgaccaaacaggaagtcg 60
Query: 2896 agtttgacacgccgtacagagaactcggtttccccggagcgccgttccgtagtactgtcc 2955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtttgacacgccgtacagagaactcggtttccccggagcgccgttccgtagtactgtcc 120
Query: 2956 tcctacaaccgacctctggagccctcgtcaacctgaccgagtggccgcccttcgtcatct 3015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcctacaaccgacctctggagccctcgtcaacctgaccgagtggccgcccttcgtcatct 180
Query: 3016 cgctggaggacgttgaactcgttcacttcgaaagagtacagttccacctcaagaacttcg 3075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgctggaggacgttgaactcgttcacttcgaaagagtacagttccacctcaagaacttcg 240
Query: 3076 atatggttttcgtgtttaaggattacgccaagaaagtcgccatggtcaatgctgtcccca 3135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atatggttttcgtgtttaaggattacgccaagaaagtcgccatggtcaatgctgtcccca 300
Query: 3136 tgaacatgctcgatcacgtcaaggagtggctgaactcgtgcgatatccggtattcggaag 3195
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaacatgctcgatcacgtcaaggaatggctgaactcgtgcgatatccggtattcggaag 360
Query: 3196 gtatccagtctctcaactggacaaaagtcatgaaaaccattactgatgatatcgaaggtt 3255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtatccagtctctcaactggacaaaagtcatgaaaaccattactgatgatatcgaaggtt 420
Query: 3256 tcttcgacaacggcggctggtctttcctggaccccgagtctgatgccgagaacgaggaac 3315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcttcgacaacggcggctggtctttcctggaccccgagtctgatgccgagaacgaggaac 480
Query: 3316 agcacgacgatgaatctgaagaggaggatgatgcgtatgaaccgacggatgctgagtcgg 3375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agcacgacgatgaatctgaagaggaggatgatgcgtatgaaccgacggatgctgagtcgg 540
Query: 3376 aagaggaatccgaagatgactcggagtacgactccgaggcttcggaaatgtccgacgact 3435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagaggaatccgaagatgactcggagtacgactccgaggcttcggaaatgtccgacgact 600
Query: 3436 ccggcgacagcgacggtggtgaagaggacgaagaatctgggaaagattggtcagatcttg 3495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccggcgacagcgacggtggtgaagaggacgaagaatctgggaaagattggtcagatcttg 660
Query: 3496 aacgcgaggccgccgaagaggataagaaggaacgcaattacgacagaccgtcgacggact 3555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aacgcgaggccgccgaagaggataagaaggaacgcaattacgacagaccgtcgacggact 720
Query: 3556 ttgatcggaaacgcaaaggcgggagagacagacaccgctatgacg 3600
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttgatcggaaacgcaaaggcgggagagacagacaccgctatgacg 765
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 469,935
Number of extensions: 8552
Number of successful extensions: 8552
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8552
Number of HSP's successfully gapped: 1
Length of query: 4480
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4462
Effective length of database: 8,109,745
Effective search space: 36185682190
Effective search space used: 36185682190
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)