BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21782 (UTR included)
(1738 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018B2F07 1425 0.0
>BF01018B2F07
Length = 788
Score = 1425 bits (719), Expect = 0.0
Identities = 759/772 (98%), Gaps = 2/772 (0%)
Strand = Plus / Plus
Query: 850 tgtttgctatagaaaaagcacaaagagatcaccttcttcagtcggtggatggagaggaga 909
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9 tgtttgctatagaaaaagcacaaagagatcatcttcttcagtcggtggatggagaggaga 68
Query: 910 gtggagttaagaatagaaagaagaaaattgatagagatggtttattacaaatgtccacag 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gtggagttaagaatagaaagaagaaaattgatagagatggtttattacaaatgtccacag 128
Query: 970 gcgtgacagagcaattgctcactataagtagacagttagcggcaacaacacagagaagtc 1029
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gtgtgacagagcaattgctcactataagtagacagttagcggcaacaacacagagaagtc 188
Query: 1030 aggatacattggacaatttggtatcatccagctcggcagtgcatggcactcaagcggaac 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aggatacattggacaatttggtatcatccagctcggcagtgcatggcactcaagcggaac 248
Query: 1090 tattaaacacagggagcacaatatcacagtcaagcaaattactaaagaaatatggccgac 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tattaaacacagggagcacaatatcacagtcaagcaaattactaaagaaatatggccgac 308
Query: 1150 gggaattcactgataaagtcatcatgttttttgcatttctcttctttctagctgtttgtt 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gggaattcactgataaagtcatcatgttttttgcatttctcttctttctagctgtttgtt 368
Query: 1210 tgtatattgtacagaaaagattgttctgatttatttattatatctcacataaattataat 1269
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgtatattgtacagaaaagattgttctgatttatttattatatctcacataaattataac 428
Query: 1270 gcaattcttcattaattaaatatctctttaatcctattttaatgtggtattgtaaataaa 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gcaattcttcattaattaaatatctctttaatcctattttaatgtggtattgtaaataaa 488
Query: 1330 tgtgttttagtactgtatttttttttattatatttcggcttggtcagattcatgtttttt 1389
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 489 tgtgttttagtactgtatttttttttattatatttcggtttggtcagattcatgtttttt 548
Query: 1390 tgggaattcttcatatttttaatatttagtatatatttaatcgtcgattttgcgacatgc 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgggaattcttcatatttttaatatttagtatatatttaatcgtcgattttgcgacatgc 608
Query: 1450 tgcttttttcaacaacaacactttacacaaatatcaacagttaatgacagattttataat 1509
||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 609 tgctttttttaacaacaacac--tacacaaatattaacagttaatgtcagattttataat 666
Query: 1510 tatagaggtttggtctgtgagtttctttatgggaattattcttgagttatttcagttatt 1569
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 667 tatagaggtttggtctgtgagtttctttatgggaattattcttgaattatttcagttatt 726
Query: 1570 ggcagggccggatttaaatttgagccgccctggggcactgaagaaaatgccg 1621
|||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 727 ggcagggccggatttaaatttgtgccgccctggggcactgannaaaatgccg 778
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 318,731
Number of extensions: 8044
Number of successful extensions: 8044
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8043
Number of HSP's successfully gapped: 1
Length of query: 1738
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1721
Effective length of database: 8,119,229
Effective search space: 13973193109
Effective search space used: 13973193109
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)