BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21788 (UTR included)
(1744 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1D02 125 3e-28
BF01023A2A12 125 3e-28
BF01037B1H08 119 2e-26
BF01031B1E12 90 1e-17
BF01062A1A05 88 6e-17
BF01010B2F09 74 8e-13
BF01040A1G09 70 1e-11
>BF01056B1D02
Length = 778
Score = 125 bits (63), Expect = 3e-28
Identities = 96/106 (90%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 1213 aatccccaacccgcctagagcgagcgtggtgattaatgctctaaccgatccatgtgagaa 1272
|||| |||||||| || |||| ||||||||| |||||||||||||| | ||||||||||
Sbjct: 640 aatcgccaacccgtcttgagcaagcgtggtggttaatgctctaacc--ttcatgtgagaa 697
Query: 1273 gaggcctttgctcagcagtgggctcctataggctgatgatgatgat 1318
|||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 698 gaggcctttgctcagcagtgggctccgataggctgatgataatgat 743
>BF01023A2A12
Length = 723
Score = 125 bits (63), Expect = 3e-28
Identities = 88/95 (92%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 1225 gcctagagcgagcgtggtgattaatgctctaaccga-tccatgtgagaagaggcctttgc 1283
|||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 251 gccttgagcgagcgtggtgattaatgctctaaccttctccatgtgataagaggcctttgc 310
Query: 1284 tcagcagtgggctcctataggctgatgatgatgat 1318
||||||||| ||||| |||||||||||||||||||
Sbjct: 311 tcagcagtgagctccgataggctgatgatgatgat 345
>BF01037B1H08
Length = 758
Score = 119 bits (60), Expect = 2e-26
Identities = 109/124 (87%), Gaps = 1/124 (0%)
Strand = Plus / Plus
Query: 1213 aatccccaacccgcctagagcgagcgtggtgattaatgctctaaccga-tccatgtgaga 1271
|||| ||| |||| || |||| ||||||||| |||||||||||||| | |||||||||
Sbjct: 243 aatcgccaccccgtcttgagcaagcgtggtgcttaatgctctaaccttctacatgtgaga 302
Query: 1272 agaggcctttgctcagcagtgggctcctataggctgatgatgatgatattaaataaaaga 1331
||||||||||||||||| ||||||||| ||||||||||| |||||||| |||| ||||||
Sbjct: 303 agaggcctttgctcagctgtgggctccgataggctgatggtgatgataataaaaaaaaga 362
Query: 1332 ttat 1335
||||
Sbjct: 363 ttat 366
>BF01031B1E12
Length = 730
Score = 89.7 bits (45), Expect = 1e-17
Identities = 92/105 (87%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 1213 aatccccaacccgcctagagcgagcgtggtgattaatgctctaacc-gatccatgtgaga 1271
|||| |||||||| || |||| |||||||||||||||||||||||| ||| |||||||
Sbjct: 113 aatcgccaacccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgtgaga 172
Query: 1272 agaggcctttgctcagcagtgggctcctataggctgatgatgatg 1316
|| || |||||||||||||||||||| ||||||| |||||||||
Sbjct: 173 ag-gggatttgctcagcagtgggctccgataggcttatgatgatg 216
>BF01062A1A05
Length = 777
Score = 87.7 bits (44), Expect = 6e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1230 gagcgagcgtggtgattaatgctctaaccga-tccatgtgagaagaggcctttgctcagc 1288
|||| |||||||||||||||||||||||| ||| |||||||||||||||||||| |||
Sbjct: 517 gagcaagcgtggtgattaatgctctaaccttctccttgtgagaagaggcctttgcttagc 576
Query: 1289 agtgggctccta 1300
||||||||||||
Sbjct: 577 agtgggctccta 588
>BF01010B2F09
Length = 764
Score = 73.8 bits (37), Expect = 8e-13
Identities = 91/107 (85%), Gaps = 4/107 (3%)
Strand = Plus / Minus
Query: 1213 aatccccaacccgcctagagcgagcgtggtgattaatgctctaacc-gatccatgtgaga 1271
|||| |||| ||| || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 365 aatcgccaatccgtcttgagcgagcgtggtgattaatgctctaaccttctccatgtgaga 306
Query: 1272 agaggcctttgctcagcagtgggctcctataggctgatgatgatgat 1318
||| |||| |||||| | ||||||| | |||||| ||||||||||
Sbjct: 305 agacgcct---ctcagcggcgggctccgacaggctggtgatgatgat 262
>BF01040A1G09
Length = 753
Score = 69.9 bits (35), Expect = 1e-11
Identities = 90/107 (84%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 1213 aatccccaacccgcctagagcgagcgtggtgattaatgctctaaccga-tccatgtgaga 1271
|||| ||||||| || |||| ||||||| |||||||||| |||| |||||| ||||
Sbjct: 31 aatcgccaacccatcttgagcaagcgtggcgattaatgcttaaaccttctccatgcgaga 90
Query: 1272 agaggcctttgctcagcagtgggctcctataggctgatgatgatgat 1318
|||||| | ||||||||||||| ||| |||||||||||||||||||
Sbjct: 91 agaggcttatgctcagcagtggcttccgataggctgatgatgatgat 137
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,790
Number of extensions: 4544
Number of successful extensions: 4544
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 4538
Number of HSP's successfully gapped: 7
Length of query: 1744
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1727
Effective length of database: 8,119,229
Effective search space: 14021908483
Effective search space used: 14021908483
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)