BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21816 (UTR included)
(3988 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_671_C1 1963 0.0
>BF14_671_C1
Length = 994
Score = 1963 bits (990), Expect = 0.0
Identities = 993/994 (99%)
Strand = Plus / Plus
Query: 2455 cttgtcactgtaaatatttacagggatttctgatttacatttcacagaacgttgaaaaag 2514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgtcactgtaaatatttacagggatttctgatttacatttcacagaacgttgaaaaag 60
Query: 2515 taatagacctccataatctgtggtgcttgaatgataatgtaagcccagcaaagaagccat 2574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taatagacctccataatctgtggtgcttgaatgataatgtaagcccagcaaagaagccat 120
Query: 2575 tgaatttaaatgtgacagtgtgcagcgaaataagtgatagctcaatgataagcgccttct 2634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaatttaaatgtgacagtgtgcagcgaaataagtgatagctcaatgataagcgccttct 180
Query: 2635 tcgtttcccacaacataccattactagcgtcggctctcactggcttcatgctgattttat 2694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgtttcccacaacataccattactagcgtcggctctcactggcttcatgctgattttat 240
Query: 2695 taatattagctttagtattcacatttagatacgcttgcagaatgtggttgtattctaatt 2754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taatattagctttagtattcacatttagatacgcttgcagaatgtggttgtattctaatt 300
Query: 2755 gcggtattaagctttcgcccttagcgggcgcctttaacgatgctgataaactttacgacg 2814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcggtattaagctttcgcccttagcgggcgcctttaacgatgctgataaactttacgacg 360
Query: 2815 cttacatttgttatagtcccaaggatgaggaatttgtcgtggagtctttagcgcgggagc 2874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttacatttgttatagtcccaaggatgaggaatttgtcgtggagtctttagcgcgggagc 420
Query: 2875 tggaaaacggttatccttcataccatttatgtctacattatagagacgtgccgcaatttg 2934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggaaaacggttatccttcataccatttatgtctacattatagagacgtgccgcaatttg 480
Query: 2935 aagcaacatatgctcagtttcccgatttggtagtcgaagcgacagaggcgtcgagacgta 2994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagcaacatatgctcagtttcccgatttggtagtcgaagcgacagaggcgtcgagacgta 540
Query: 2995 ttatagtagtgttatctaaaaactttatattaactgaatggtcacaaatagagtttaggc 3054
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttatagtagtattatctaaaaactttatattaactgaatggtcacaaatagagtttaggc 600
Query: 3055 aagcgttacagagggctcttcgtaaaaatcctcataagttaattgtagtcgtcgtagggc 3114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagcgttacagagggctcttcgtaaaaatcctcataagttaattgtagtcgtcgtagggc 660
Query: 3115 tactagctcgagatccggaattaaaatcatatttcaaaagtgctttggagataacatgga 3174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tactagctcgagatccggaattaaaatcatatttcaaaagtgctttggagataacatgga 720
Query: 3175 aagagaaaagattttgggagcgattacgatatgcgatgccgtcatgtaagcgacgcgggc 3234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aagagaaaagattttgggagcgattacgatatgcgatgccgtcatgtaagcgacgcgggc 780
Query: 3235 acaaattgaagaggcttaattatggaagaaattccaacacgtacacaatggacgcgtcgg 3294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 acaaattgaagaggcttaattatggaagaaattccaacacgtacacaatggacgcgtcgg 840
Query: 3295 tgctaaatagtacctgtcaaacgctctgcggcaaatccgcaaattcagtagaacgttctc 3354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgctaaatagtacctgtcaaacgctctgcggcaaatccgcaaattcagtagaacgttctc 900
Query: 3355 cttgtgacaggccgttgtccgagcacatatattccactatagattcggattattcgtcaa 3414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cttgtgacaggccgttgtccgagcacatatattccactatagattcggattattcgtcaa 960
Query: 3415 acgatttccaaggccgccacaatcaccaacaatc 3448
||||||||||||||||||||||||||||||||||
Sbjct: 961 acgatttccaaggccgccacaatcaccaacaatc 994
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 508,187
Number of extensions: 10103
Number of successful extensions: 10103
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10103
Number of HSP's successfully gapped: 1
Length of query: 3988
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3970
Effective length of database: 8,109,745
Effective search space: 32195687650
Effective search space used: 32195687650
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)