BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21817 (UTR included)
(2453 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B2C07 531 e-150
>BF01058B2C07
Length = 779
Score = 531 bits (268), Expect = e-150
Identities = 286/292 (97%)
Strand = Plus / Plus
Query: 2086 ataccgctaccgaactcatcatagcagggttgtcagcgagcagcacatcggttcgtgctg 2145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataccgctaccgaactcatcatagcagggttgtcagcgagcagcacatcggttcgtgctg 60
Query: 2146 ctgcagcgtcatgcgccggaaggctctgtgggtgtatcaccgagtctgagacgcaggcac 2205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgcagcgtcatgcgccggaaggctctgtgggtgtatcaccgagtctgagacgcaggcac 120
Query: 2206 tgagcgaacgcgtcatagccctcgctaggacgtcccctaatagatcggtccgtgcagccg 2265
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 tgagcgaacgcgtgatagccctcgctaggacgtctcctaatagatcggtccgtgcagccg 180
Query: 2266 ctgcagccgccgtcggaaccgtgcagcgggcgagaggtgctgcgtcaagcgctgcagcgc 2325
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgcagccgccgtcggaactgtgcagcgggcgagaggtgctgcgtcaagcgctgcagcgc 240
Query: 2326 tgccagtgctaagagccttggcacaggatacggctgcggtggaagtgcaggt 2377
||||||||||||||||| |||| ||||||||||||||||||||| |||||||
Sbjct: 241 tgccagtgctaagagccctggcccaggatacggctgcggtggaaatgcaggt 292
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,408
Number of extensions: 5436
Number of successful extensions: 5436
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5436
Number of HSP's successfully gapped: 1
Length of query: 2453
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2436
Effective length of database: 8,119,229
Effective search space: 19778441844
Effective search space used: 19778441844
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)