BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21825 (UTR included)
(2902 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061B2F08 1483 0.0
>BF01061B2F08
Length = 800
Score = 1483 bits (748), Expect = 0.0
Identities = 788/801 (98%), Gaps = 1/801 (0%)
Strand = Plus / Plus
Query: 1903 ggagtcgggagatggaatcttataatgctcagttcatgacagccttcaaggcgacaccag 1962
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 ggagccgggagatggaatcttataatgctcagttcatgacagccttcaaagcgacaccag 60
Query: 1963 cctacgacaagtggttgaaagccacaaacaatgccaacatagaacccttcatgaacctga 2022
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 cctacgacaagtggttgaaagccacaaacaatgccaacatagaaccattcatgaacctga 120
Query: 2023 ctcctatgcatccgttttctggacaactatctgtcgctgacatgaagttaaaattggcac 2082
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcctatgcatccgttttctggacagctatctgtcgctgacatgaagttaaaattggcac 180
Query: 2083 atactatgtcgactacggagggcggtcgtaaggtgacggcggccgtggcgagcacggggc 2142
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 atactatgtcgactacggagggcggtcgtaaggtaacggcggccgtggcgagcacggggc 240
Query: 2143 gggctgtggcgagcacgtcgcgggccgtgggcggagcgctgtcacatgctcgcggcgcgc 2202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggctgtggcgagcacgtcgcgggccgtgggcggagcgctgtcacatgctcgcggcgcgc 300
Query: 2203 tatcgggctggtggagcgcgctcacagcgcccacgaccgcgcccaccgacccggacgtgg 2262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatcgggctggtggagcgcgctcacagcgcccacgaccgcgcccaccgacccggacgtgg 360
Query: 2263 tcgacttgagcgacgtgagcgatgctgtagaagcagatgacgcgacgggtcaactggaag 2322
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 tcgacttgagcgacgtgagcgatgctgtagaagcagatgacgcgacgggtcaactcgaag 420
Query: 2323 acgacaaccgccgcctcccggatcctcccgacaagcgactcgaccccgccatcgacgtca 2382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgacaaccgccgcctcccggatcctcccgacaagcgactcgaccccgccatcgacgtca 480
Query: 2383 ccaacataagagtcatttaatgtgtgatacttgaacagtagaaggttatcgtccccgtct 2442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaacataagagtcatttaatgtgtgatacttgaacagtagaaggttatcgtccccgtct 540
Query: 2443 catgcgatcgtttcttgtgtgataaattctcatatatttttttagattgttttttacata 2502
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catgcgatcgtttcttgcgtgataaattctcatatatttttttagattgttttttacata 600
Query: 2503 tttttttttctctatcacgtttcagcgttgtacagacttaagaattttacatctccgatt 2562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttttttttctctatcacgtttcagcgttgtacagacttaagaattttacatctccgatt 660
Query: 2563 atcgatgtacatttaatttattacgtgatcgagttatttttttttaacaactactcagat 2622
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 661 atcgatgtacatttaatttattacgtgatcgagtta-ttttttttaacaactactcagat 719
Query: 2623 agtgtttacgtcaaacctcctgtacttgttacatagttacaactgtagtaatcgatgctt 2682
|||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 720 agtgtttacgtcaaaccttctgtatttnnnacatagttacaactgtagtaatcgatgctt 779
Query: 2683 aacctttttatgtacttcatc 2703
|||||||||||||||||||||
Sbjct: 780 aacctttttatgtacttcatc 800
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 373,410
Number of extensions: 8391
Number of successful extensions: 8391
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8388
Number of HSP's successfully gapped: 1
Length of query: 2902
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2884
Effective length of database: 8,109,745
Effective search space: 23388504580
Effective search space used: 23388504580
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)