BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21891 (UTR included)
(1531 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 149 2e-35
BF14_335_C4 131 4e-30
BF14_335_C2 107 5e-23
BF01049B1F01 94 8e-19
BF01044B1A07 92 3e-18
BF01016A2B02 92 3e-18
BF01014B2F02 88 5e-17
BF01056B2D01 84 8e-16
BF01016B1E06 76 2e-13
BF01011B1F08 72 3e-12
>BF01019A1H08
Length = 504
Score = 149 bits (75), Expect = 2e-35
Identities = 117/131 (89%)
Strand = Plus / Plus
Query: 183 atgagacgaaacttctcagcattccatggattcaccgtgaggataccgagtccatcgcgt 242
|||||| ||||| ||| ||||||| |||||||||||||| || | ||| |||||||||||
Sbjct: 362 atgagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgt 421
Query: 243 tgcagggagaggagcttctacagtgcatgggacttgcgacccaggtgtagctttacgggg 302
|||||||||||||||||| ||||||| ||||| ||||||||||||||||| |||| ||||
Sbjct: 422 tgcagggagaggagcttcaacagtgcctgggagttgcgacccaggtgtaggtttaagggg 481
Query: 303 cccctatctaa 313
| |||||||||
Sbjct: 482 ctcctatctaa 492
>BF14_335_C4
Length = 1491
Score = 131 bits (66), Expect = 4e-30
Identities = 109/122 (89%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 183 atgagacgaaacttctcagcattccatggattcaccgtgaggataccgagtccatcgcgt 242
||||||||||| |||||||||||||||||||||||||| || | | | | |||||||||
Sbjct: 1366 atgagacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgt 1307
Query: 243 tgcagggagaggagcttctacagtgcatgggacttgcgacccaggtgtagctttacgggg 302
|||||| ||||||||||| ||||||| ||||||||||||||||||||||| |||| ||||
Sbjct: 1306 tgcagg-agaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtttaagggg 1248
Query: 303 cc 304
||
Sbjct: 1247 cc 1246
>BF14_335_C2
Length = 1827
Score = 107 bits (54), Expect = 5e-23
Identities = 112/130 (86%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 185 gagacgaaacttctcagcattccatggattcaccgtgaggataccgagtccatcgcgttg 244
|||||||||| ||| ||| ||| |||||||||||||| || | ||| |||| |||||||
Sbjct: 808 gagacgaaacctcttagctttctatggattcaccgtgcgggtgccgggtccgccgcgttg 867
Query: 245 cagggagaggagcttctacagtgcatgggacttgcgacccaggtgtagctttacggggcc 304
|||||||||||||||| ||||||| ||||| ||||||| ||||||||| |||| | |||
Sbjct: 868 cagggagaggagcttcaacagtgcctgggatttgcgacacaggtgtaggttta-agagcc 926
Query: 305 cctatctaac 314
||||||||||
Sbjct: 927 cctatctaac 936
>BF01049B1F01
Length = 840
Score = 93.7 bits (47), Expect = 8e-19
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 240 cgttgcagggagaggagcttctacagtgcatgggacttgcgacccaggtgtagctttacg 299
||||||||||||||||||||| ||||||| ||||||||||||||||||||||| | || |
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgtaggtgtaag 646
Query: 300 gggcccctatctaac 314
||| |||||||||||
Sbjct: 647 ggg-ccctatctaac 660
>BF01044B1A07
Length = 806
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 189 cgaaacttctcagcattccatggattcaccgtgaggataccgagtccatcgcgttgcagg 248
|||||||||||||| ||| |||||||||||||| || | || ||||||||||| |||||
Sbjct: 431 cgaaacttctcagcgttcaatggattcaccgtgcgggtggcgggtccatcgcgtggcagg 490
Query: 249 gagaggagcttctacagtgcatgggacttgcgacccaggtgt 290
|||||||||||| || ||| ||||||| |||| ||||||||
Sbjct: 491 gagaggagcttcaactgtgtctgggactcgcgaaccaggtgt 532
>BF01016A2B02
Length = 780
Score = 91.7 bits (46), Expect = 3e-18
Identities = 110/130 (84%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 185 gagacgaaacttctcagcattccatggattcaccgtgaggataccgagtccatcgcgttg 244
|||||||||||| || |||| ||| |||||||||||| | | ||| |||| |||||||
Sbjct: 170 gagacgaaacttgtccgcatcccagggattcaccgtgctg-tgccgggtcccgcgcgttg 228
Query: 245 cagggagaggagcttctacagtgcatgggacttgcgacccaggtgtagctttacggggcc 304
||||||||||||||| ||||||| ||||| ||||||| ||||||||| ||| | ||||
Sbjct: 229 aagggagaggagcttcaacagtgcctgggaattgcgactcaggtgtaggcttaagaggcc 288
Query: 305 cctatctaac 314
||||||||||
Sbjct: 289 cctatctaac 298
>BF01014B2F02
Length = 623
Score = 87.7 bits (44), Expect = 5e-17
Identities = 92/107 (85%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 185 gagacgaaacttctcagcattccatggattcaccgtgaggataccgagtccatcgcgttg 244
|||||||||| ||||||||||| ||||| ||||||| || | ||| ||||| ||||||
Sbjct: 519 gagacgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtcca--gcgttg 576
Query: 245 cagggagaggagcttctacagtgcatgggacttgcgacccaggtgta 291
|||||||||||||||| ||| || | ||||||||||||||||||||
Sbjct: 577 cagggagaggagcttcagcagcgcctaggacttgcgacccaggtgta 623
>BF01056B2D01
Length = 728
Score = 83.8 bits (42), Expect = 8e-16
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 186 agacgaaacttctcagcattccatggattcaccgtgaggataccgagtccatcgcgttgc 245
||||||||| ||||| ||||||||| |||||||||| || | ||| ||||||| | ||||
Sbjct: 77 agacgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccatcacattgc 136
Query: 246 agggagaggagcttctacagtgcatgggac 275
||||||||||||||| |||| || ||||||
Sbjct: 137 agggagaggagcttcaacagcgcctgggac 166
>BF01016B1E06
Length = 606
Score = 75.8 bits (38), Expect = 2e-13
Identities = 84/97 (86%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 241 gttgcagggagaggagcttctacagtgcatgggacttgcgacccaggtgtagctttacgg 300
||||||| |||||||||||| ||||||| |||| | ||||||||||||||| |||| ||
Sbjct: 193 gttgcagagagaggagcttcaacagtgccggggagtagcgacccaggtgtaggtttaagg 252
Query: 301 ggcccctatctaa--cgttaaacgcttacccccaccg 335
|| |||||||||| ||||||||||| ||| ||||||
Sbjct: 253 gg-ccctatctaacgcgttaaacgctcacctccaccg 288
>BF01011B1F08
Length = 645
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 187 gacgaaacttctcagcattccatggattcaccgtgaggataccgagtccatcgcgttgca 246
|||||||| ||||||||||||||| | |||||||| |||||||| ||| |||||||||||
Sbjct: 586 gacgaaacctctcagcattccatgaactcaccgtgtggataccgggtcgatcgcgttgca 645
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,476
Number of extensions: 17846
Number of successful extensions: 17846
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 17840
Number of HSP's successfully gapped: 11
Length of query: 1531
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1514
Effective length of database: 8,119,229
Effective search space: 12292512706
Effective search space used: 12292512706
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)