BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21893 (UTR included)
(1936 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B1C03 1423 0.0
>BF01022B1C03
Length = 791
Score = 1423 bits (718), Expect = 0.0
Identities = 772/792 (97%), Gaps = 16/792 (2%)
Strand = Plus / Plus
Query: 380 tgcattaaagttttagattataaataagtaataattacaactataataagaaacaaaagt 439
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 tgcattaaagttttagattataaataagtaataattacaactatattaagaaacaaaagt 60
Query: 440 tataactgttatacaacattataccttaaattatatgaacgtcttataataatttaccaa 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tataactgttatacaacattataccttaaattatatgaacgtcttataataatttaccaa 120
Query: 500 tatgtcagatgatggtttaattaccgctaaatgtaggttattagagatattcgcaaatta 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatgtcagatgatggtttaattaccgctaaatgtaggttattagagatattcgcaaatta 180
Query: 560 tgataatactgaattggaaaatattgaaaaatggatttcttcacaggcttataaaaaag- 618
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgataatactgaattggaaaatattgaaaaatggatttcttcacaggcttataaaaaagg 240
Query: 619 --------------atttggagaagaaaaaatctttactgaaaggtgaaaagaaattgaa 664
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaagttattacagatttggagaagaaaaaatctttactgaaaggtgaaaagaaattgaa 300
Query: 665 aaggattggtgattatattaataaacttataccatttgaagctgaaatggctactgaaag 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggattggtgattatattaataaacttataccatttgaagctgaaatggctactgaaag 360
Query: 725 tatatcaccaccagttgttggtgatcaggctgattgcaataaagagaacacatgtcatgt 784
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 tatatcaccaccagttgttggtgatcaggct-attgcaataaagagaacacatgtcatgt 419
Query: 785 tgatgagttcctgtatgatgagaatcaagttgaagatctggtgaaaaaaggaaaagttaa 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgatgagttcctgtatgatgagaatcaagttgaagatctggtgaaaaaaggaaaagttaa 479
Query: 845 caggaattattgtttggactgcaactctaggaatgtaaaggaactaacgtatatctctca 904
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 480 caggaattattgtttagactgcaactctaggaatgtaaaggaactaacctatatctctca 539
Query: 905 ctctatgtcgagaagggctttgcagtacatattccatgttttgttaccaaaggatttaga 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ctctatgtcgagaagggctttgcagtacatattccatgttttgttaccaaaggatttaga 599
Query: 965 aaataaacaacttgtagacataggctcaagactgggggctgtgttatatggtgcttataa 1024
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 600 aaataaacaacttgtagacataggctcaagattgggggctgtgttatatggtgcttataa 659
Query: 1025 tttttctaatgcatcaaaaatagttggcattgaaataaataaagagttttgtgatgtgca 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tttttctaatgcatcaaaaatagttggcattgaaataaataaagagttttgtgatgtgca 719
Query: 1085 agaagctacaataaataaattttctatgcaaaaagaaagaatagaagtaatacatgcaga 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 agaagctacaataaataaattttctatgcaaaaagaaagaatagaagtaatacatgcaga 779
Query: 1145 tgtcataactag 1156
||||||||||||
Sbjct: 780 tgtcataactag 791
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 338,338
Number of extensions: 8712
Number of successful extensions: 8712
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8711
Number of HSP's successfully gapped: 2
Length of query: 1936
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1919
Effective length of database: 8,119,229
Effective search space: 15580800451
Effective search space used: 15580800451
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)