BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21900 (UTR included)
(1237 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A1B08 595 e-170
>BF01033A1B08
Length = 787
Score = 595 bits (300), Expect = e-170
Identities = 515/583 (88%), Gaps = 24/583 (4%)
Strand = Plus / Plus
Query: 566 ggctaaagaagaggctcaggatgaggtggagaagtacagacaggagcgggagaagcagtt 625
|||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 130 ggctaaggaggaggctcaggatgaggtggagaagtacagacaggagcgggagaggcagtt 189
Query: 626 taaagatttcgaagccaagcacatggacacaggggaggaaatcaccgccaaaattggttc 685
|||||||||||||||||||||||||| |||| |||||| | || |||||||||||| | |
Sbjct: 190 taaagatttcgaagccaagcacatgggcacaagggagggagtcgccgccaaaattgatgc 249
Query: 686 tgagaccagagtgaaaatcgataaggtgaacaaattggtccagatgcaataggaaaccgt 745
|||||||||||||||||||||| || ||||||||||||||||||||||| ||||||| ||
Sbjct: 250 tgagaccagagtgaaaatcgatgagatgaacaaattggtccagatgcaacaggaaacggt 309
Query: 746 gatcacagacatcctaaatcttgtgtacgacatcaagctggaacttcacgtcaactaaag 805
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 310 gatcacagacatcctgaatcttgtgtacgacatcaagccggaacttcacgtcaactaccg 369
Query: 806 catataataagcgaaacac---aataattaatgttacttctttcgcttttaaaaccgtcg 862
| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cttagaataagcgaaacacaataataattaatgttacttctttcgcttttaaaaccgtcg 429
Query: 863 cgaatcaagttgtctctgtta----taatccgtagtcaattttggcgtgcgtcaaatttc 918
|||| | ||||||| |||||| |||| ||| || |||||||||||||||||||||
Sbjct: 430 cgaacctagttgtcactgttataattaattaatagccacttttggcgtgcgtcaaatttc 489
Query: 919 gtgccaaacaaaatggctgccgtataatat-tat-----tagcttaaagccatttaatat 972
| ||||||||||||||||| ||||| | | ||| |||||||||||||||||||||
Sbjct: 490 gcgccaaacaaaatggctgtcgtatgctgtatatacagatagcttaaagccatttaatat 549
Query: 973 ttattatcctaaacatttcagtataatcagctcgataccattccatttgtgaccttggag 1032
|||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||
Sbjct: 550 ttattatcctaaacatttaattataatcagctcgatatcattccatttgtgaccttggag 609
Query: 1033 gatctgcttacgaacacaatatatatatatatatatatatatttaaattg-------ttc 1085
|||| |||||||||||||| | | | ||||| |||||||| |||||||| |||
Sbjct: 610 gatccgcttacgaacacaa-aaaaaaatataaatatatattattaaattgtatgttattc 668
Query: 1086 aatgttgttatatgttgaatagaagtatatggagttttaaaat 1128
|| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 669 aa---tgttatatgttgaatagaaatatatggagttttaaaat 708
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,336
Number of extensions: 14298
Number of successful extensions: 14298
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14297
Number of HSP's successfully gapped: 4
Length of query: 1237
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1220
Effective length of database: 8,119,229
Effective search space: 9905459380
Effective search space used: 9905459380
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)