BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21906 (UTR included)
(1718 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B2E08 1041 0.0
BF14_2291_C1 720 0.0
BF01062A1F03 228 2e-59
>BF01058B2E08
Length = 761
Score = 1041 bits (525), Expect = 0.0
Identities = 578/601 (96%), Gaps = 21/601 (3%)
Strand = Plus / Plus
Query: 1 acgcaggcccaaacaacacaatcatcagcattcggtcaaacaacacaaggcttagccacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acgcaggcccaaacaacacaatcatcagcattcggtcaaacaacacaaggcttagccacc 241
Query: 61 acagtgaaaacaacacaagcaatgtttggccaatcacagccatcacagacgccaagtttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acagtgaaaacaacacaagcaatgtttggccaatcacagccatcacagacgccaagtttc 301
Query: 121 ggccaatccggccagacctctacatcacagacaactcaagccataagcttcagtacaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggccaatccggccagacctctacatcacagacaactcaagccataagcttcagtacaagt 361
Query: 181 ctttctacggcacaaaccactagtgcatcgggactatcgactagcgggttaggaatatcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctttctacggcacaaaccactagtgcatcgggactatcgactagcgggttaggaatatcg 421
Query: 241 accagtggtttcgggctcacaactagtgggacgggaatctcgacgagcggtttgggaata 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 actagtggtttcgggctcacaactagtgggacgggaatctcgacgagcggtttgggaata 481
Query: 301 tcatcgagtttaggagtgtcgactgcaacagcgggaatcactactagcagcttggggata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcatcgagtttaggagtgtcgactgcaacagcgggaatcactactagcagcttggggata 541
Query: 361 tccacaagcgctctgggaaccactaccacgagtggtatatctctcgccggtggcttatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tccacaagcgctctgggaaccactaccacgagtggtatatctctcgccggtggcttatca 601
Query: 421 ttcgccaagacaacaacagcaacttcaacgaccccgtccggtataacagcgttgggtaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttcgccaagacaacaacagcaacttcaacgaccccgtccggtataacagcgttgggtaaa 661
Query: 481 acggctgcaagtgtgatgcctcctactacagttgttgttgttctcatcgccagatcccaa 540
|||||||||||||||||||||||||||||||| |||||||
Sbjct: 662 acggctgcaagtgtgatgcctcctactacagt---------------------atcccaa 700
Query: 541 gcccctccagcggctataacttcaataaatttcgcggaactccaggaaaatatcaataag 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 701 gcccctccagcggctataacttcaataaatttcgcggaactccaagaaaatatcaataag 760
Query: 601 t 601
|
Sbjct: 761 t 761
>BF14_2291_C1
Length = 1113
Score = 720 bits (363), Expect = 0.0
Identities = 372/375 (99%)
Strand = Plus / Minus
Query: 1165 cctccaccctacgtgacactggcagagtatacgtgcgggtcttcgcacggatgaaggcca 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 cctccaccctacgtgacactggcagagtatacgtgcgggtcttcgcacggatgaaggcca 1028
Query: 1225 tataataaaaaaaagaaagctgtatctctcgaaatatactaatttacaatgataaacatg 1284
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1027 tataataaaaaaaagaaagctgtatctctcgaaatatactaatttacaatgataaatatg 968
Query: 1285 aaacaagtaattctcgacgcctattaatatacaatacccataataaaacactgaaaaata 1344
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 967 aaacaagtaattctcgacgcccattaatatacaatacccataataaaacactgaaaaata 908
Query: 1345 acattctctttagtgtgaaggtggagcacgaccagtcgcttgtgtatgatgtggcataac 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 acattctctttagtgtgaaggtggagcacgaccagtcgcttgtgtatgatgtggcataac 848
Query: 1405 gttctgttgtgtgatatctgttcagcgtttagaaacatcgaaaatttcttagcgtcgatt 1464
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gttctgttgtgtgatatttgttcagcgtttagaaacatcgaaaatttcttagcgtcgatt 788
Query: 1465 ctacaggaacatatcttggaaacgtcctcacacgtctgactctctgtctccgagtccgag 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ctacaggaacatatcttggaaacgtcctcacacgtctgactctctgtctccgagtccgag 728
Query: 1525 tggtctatgggacct 1539
|||||||||||||||
Sbjct: 727 tggtctatgggacct 713
>BF01062A1F03
Length = 800
Score = 228 bits (115), Expect = 2e-59
Identities = 130/135 (96%)
Strand = Plus / Plus
Query: 562 tcaataaatttcgcggaactccaggaaaatatcaataagtggagtttgtctttggaggaa 621
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaataaatttcgcggaactccaagaaaatatcaataagtggagtttgtctttggaggag 60
Query: 622 caggagagagttttctacagacaagcgactacactcaacgcctgggacagactatcggcg 681
|||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 61 caggagagggttttctacagacaagcgactacgctcaacgcctgggacagactgtcggcg 120
Query: 682 agtaacggtgaaaag 696
|||||||||||||||
Sbjct: 121 agtaacggtgaaaag 135
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 164,801
Number of extensions: 2940
Number of successful extensions: 2940
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2936
Number of HSP's successfully gapped: 4
Length of query: 1718
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1701
Effective length of database: 8,119,229
Effective search space: 13810808529
Effective search space used: 13810808529
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)