BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN21908 (UTR included)
(1375 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 165 2e-40
BF14_335_C4 121 3e-27
BF14_335_C2 119 1e-26
BF01049B1F01 107 5e-23
BF01056B2D01 96 2e-19
BF14_335_C5 90 1e-17
BF01044B1A07 88 4e-17
BF01016A2B02 88 4e-17
BF01016B1E06 82 3e-15
BF01014B2F02 82 3e-15
BF01045B1A06 74 7e-13
BF01044B2F11 68 4e-11
>BF01019A1H08
Length = 504
Score = 165 bits (83), Expect = 2e-40
Identities = 104/111 (93%)
Strand = Plus / Minus
Query: 625 ataggggccccttaaacctacagctgggtcgcaagtcccaggcattgttgaagctcctct 684
||||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||
Sbjct: 488 ataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctct 429
Query: 685 ccctgcaacgtgatagacccggcacccgcacggtgaatccattcaatgcta 735
|||||||||| ||| |||||||||||||||||||||||||||| |||||||
Sbjct: 428 ccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgcta 378
>BF14_335_C4
Length = 1491
Score = 121 bits (61), Expect = 3e-27
Identities = 89/97 (91%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 630 ggccccttaaacctacagctgggtcgcaagtcccaggcattgttgaagctcctctccctg 689
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 1246 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctg 1304
Query: 690 caacgtgatagacccggcacccgcacggtgaatccat 726
||||| ||| | ||| ||| |||||||||||||||||
Sbjct: 1305 caacgcgatggtccccgcaaccgcacggtgaatccat 1341
>BF14_335_C2
Length = 1827
Score = 119 bits (60), Expect = 1e-26
Identities = 84/92 (91%)
Strand = Plus / Minus
Query: 635 cttaaacctacagctgggtcgcaagtcccaggcattgttgaagctcctctccctgcaacg 694
|||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 695 tgatagacccggcacccgcacggtgaatccat 726
| |||||||||||||||||||||||||||
Sbjct: 862 cggcggacccggcacccgcacggtgaatccat 831
>BF01049B1F01
Length = 840
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 629 gggccccttaaacctacagctgggtcgcaagtcccaggcattgttgaagctcctctccct 688
|||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 652 gggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccct 593
Query: 689 gcaacg 694
||||||
Sbjct: 592 gcaacg 587
>BF01056B2D01
Length = 728
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 659 gtcccaggcattgttgaagctcctctccctgcaacgtgatagacccggcacccgcacggt 718
||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 719 gaat 722
||||
Sbjct: 106 gaat 103
>BF14_335_C5
Length = 1597
Score = 89.7 bits (45), Expect = 1e-17
Identities = 85/99 (85%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 627 aggggccccttaaacctacagctgggtcgcaagtcccaggcattgttgaagctcctctcc 686
|||||| ||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 1491 aggggcgccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctcc 1550
Query: 687 ctgcaacgtgatagacccggcacccgcacggtgaatcca 725
||||| ||| |||||||||||||||||||||||||
Sbjct: 1551 gtgcaa--agatgcacccggcacccgcacggtgaatcca 1587
>BF01044B1A07
Length = 806
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 648 ctgggtcgcaagtcccaggcattgttgaagctcctctccctgcaacgtgatagacccggc 707
|||| |||| |||||||| || |||||||||||||||||||| ||| ||| |||||| |
Sbjct: 528 ctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacccgcc 469
Query: 708 acccgcacggtgaatccatt 727
||||||||||||||||||||
Sbjct: 468 acccgcacggtgaatccatt 449
>BF01016A2B02
Length = 780
Score = 87.7 bits (44), Expect = 4e-17
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 625 ataggggccccttaaacctacagctgggtcgcaagtcccaggcattgttgaagctcctct 684
||||||||| ||||| |||||| ||| ||||||| ||||||||| |||||||||||||||
Sbjct: 293 ataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctct 234
Query: 685 ccctgcaacgtgatagacccggcacccgcacggtgaatcc 724
|||| ||||| | ||||||||| | |||||||||||||
Sbjct: 233 cccttcaacgcgcgggacccggca-cagcacggtgaatcc 195
>BF01016B1E06
Length = 606
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 629 gggccccttaaacctacagctgggtcgcaagtcccaggcattgttgaagctcctctccct 688
|||||||||||||||||| ||||||||| | |||| |||| |||||||||||||||| ||
Sbjct: 257 gggccccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctct 198
Query: 689 gcaac 693
|||||
Sbjct: 197 gcaac 193
>BF01014B2F02
Length = 623
Score = 81.8 bits (41), Expect = 3e-15
Identities = 80/92 (86%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 643 tacagctgggtcgcaagtcccaggcattgttgaagctcctctccctgcaacgtgatagac 702
|||| ||||||||||||||| |||| || ||||||||||||||||||||| | | |||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaac--gctggac 566
Query: 703 ccggcacccgcacggtgaatccattcaatgct 734
||||||||||||||||| ||||| | ||||||
Sbjct: 565 ccggcacccgcacggtgcatccactgaatgct 534
>BF01045B1A06
Length = 820
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 656 caagtcccaggcattgttgaagctcctctccctgcaacgtgatagacccggcacccgcac 715
||||||| ||||| |||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 748 caagtccaaggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgcat 689
Query: 716 ggtgaatcc 724
|||||||||
Sbjct: 688 ggtgaatcc 680
>BF01044B2F11
Length = 728
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 625 ataggggccccttaaacctacagctgggtcgcaagtcccaggcattgttgaagctcctct 684
||||||||| |||||||||||| ||| | |||||||||||| ||| |||||||||||
Sbjct: 639 ataggggccacttaaacctacacctgaattgcaagtcccaggtgctgtcgaagctcctct 698
Query: 685 ccctgcaacg 694
||||||||||
Sbjct: 699 ccctgcaacg 708
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 180,779
Number of extensions: 4159
Number of successful extensions: 4159
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 4155
Number of HSP's successfully gapped: 12
Length of query: 1375
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1358
Effective length of database: 8,119,229
Effective search space: 11025912982
Effective search space used: 11025912982
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)